| Gene name |
SPCC594.06c |
| Gene ID |
16/C07 |
| Gene synonyms/obsolete |
|
| Gene product |
sorting nexin; PX
domain; phosphoinositide binding; involved in intracellular
protein transport; similar to U. maydis Yup1; no apparent Sc
ortholog; SNARE domain possibly false positive |
| Entry clone |
Cloned |
| ORF length (unspliced) |
1062 |
| ORF length (spliced) |
1026 |
| Entry clone length |
1062 |
| No. of intron |
1 |
| Sequence status |
Finished |
| Sequence results |
100% match |
| Comments |
|
| Polymerase used for cloning |
Platinum Taq HiFi
(Invitrogen) |
| Fwd primer name |
SPCC594.06.Fd |
| Fwd primer SEQ |
AAAAAGCAGGCTCTCATATGGCGCTAAAAATTAAAAT |
| Rev primer name |
SPCC594.06.Rv |
| Rev primer SEQ |
AGAAAGCTGGGTAACCCAATTTGCGAAGGCCA |
| Amino acid length |
341 |
| Molecular weight |
38.8 |
| Isoelectric point (calc.) |
9.6 |
| Signal SEQ |
|
| No. of transmembrane domain |
|
| NLS position (Columbia Univ.
Bioinformatics Center) |
none |
| NES motif (
L-x(2,3)-[IVLMF]-x(2,3)-L-x-[LI]) |
LSESLDKLEL |
| Localization (YFP) |
vacuole |
| Comments for localization |
aggregates |
| Effect of LMB on protein
localization |
no change |
| Microscope used for
observation |
DeltaVision |