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Schizosaccharomyces pombe Postgenome Database

Gene name SPBC16A3.09c
Gene ID 40/D12
Gene synonyms/obsolete ufd1
Gene product ubiquitin fusion degradation protein (putative); Cdc48-Ufd1-Npl4 complex component (putative); involved in proteasomal processing; involved in the recognition of polyubiquitin-tagged proteins
Entry clone Cloned
ORF length (unspliced) 1360
ORF length (spliced) 1029
Entry clone length 1360
No. of intron 4
Sequence status Finished
Sequence results 99T:C / 430T:C
Comments
Polymerase used for cloning Platinum Taq HiFi (Invitrogen)
Fwd primer name SPBC16A3.09.Fd
Fwd primer SEQ AAAAAGCAGGCTCTCATATGGGCGGCAGCTTTTTCTC
Rev primer name SPBC16A3.09.Rv
Rev primer SEQ AGAAAGCTGGGTAAGCATCAATATCGATTGGG
Amino acid length 342
Molecular weight 38.2
Isoelectric point (calc.) 4.5
Signal SEQ
No. of transmembrane domain
NLS position (Columbia Univ. Bioinformatics Center) none
NES motif ( L-x(2,3)-[IVLMF]-x(2,3)-L-x-[LI]) LPYWMMTTLSL
Localization (YFP) nucleus>cytosol
Comments for localization
Effect of LMB on protein localization no change
Microscope used for observation DeltaVision

Image information
YFP 1 images) See all images

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