RIKEN Publication
Published Research Papers of RIKEN Researchersupdate: Sun, 29 Jun 2008 21:18:35 -0400
total number of papers: 58- Structural basis of actin recognition and arginine ADP-ribosylation by Clostridium perfringens L-toxin
Tsuge, H; Nagahama, M; Oda, M; et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 105 (21): 7399-7404 MAY 27 2008

- Mutant SOD1 in cell types other than motor neurons and oligodendrocytes accelerates onset of disease in ALS mice
Yamanaka, K; Boillee, S; Roberts, EA; et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 105 (21): 7594-7599 MAY 27 2008

- Mapping of the phosphorylation sites on the phototropic signal transducer, NPH3
Tsuchida-Mayama, T; Nakano, M; Uehara, Y; et al.
PLANT SCIENCE 174 (6): 626-633 JUN 2008

- The maize Viviparous8 locus, encoding a putative ALTERED MERISTEM PROGRAM1-like peptidase, regulates abscisic acid accumulation and coordinates embryo and endosperm development
Suzuki, M; Latshaw, S; Sato, Y; et al.
PLANT PHYSIOLOGY 146 (3): 1193-1206 MAR 2008

- High temperature-induced abscisic acid biosynthesis and its role in the inhibition of gibberellin action in Arabidopsis seeds
Toh, S; Imamura, A; Watanabe, A; et al.
PLANT PHYSIOLOGY 146 (3): 1368-1385 MAR 2008

- Phytochrome- and gibberellin-mediated regulation of abscisic acid metabolism during germination of photoblastic lettuce seeds
Sawada, Y; Aoki, M; Nakaminami, K; et al.
PLANT PHYSIOLOGY 146 (3): 1386-1396 MAR 2008

- Potential sites of bioactive gibberellin production during reproductive growth in Arabidopsis
Hu, JH; Mitchum, MG; Barnaby, N; et al.
PLANT CELL 20 (2): 320-336 FEB 2008

- Euclidean lattice simulation for dynamical supersymmetry breaking
Kanamori, I; Suzuki, H; Sugino, F
PHYSICAL REVIEW D 77 (9): Art. No. 091502 MAY 2008

- B-K with two flavors of dynamical overlap fermions
Aoki, S; Fukaya, H; Hashimoto, S; et al.
PHYSICAL REVIEW D 77 (9): Art. No. 094503 MAY 2008

- Cherenkov phase-matched monochromatic THz-wave generation using difference frequency generation with a lithium niobate crystal
Suizu, K; Shibuya, T; Akiba, T; et al.
OPTICS EXPRESS 16 (10): 7493-7498 MAY 12 2008

- Optical rectification effect in 1D metallic photonic crystal slabs with asymmetric unit cell
Hatano, T; Nishikawa, B; Iwanaga, M; et al.
OPTICS EXPRESS 16 (11): 8236-8241 MAY 26 2008

- Voltage-driven quantum oscillations in graphene
Yampol'skii, VA; Savel'ev, S; Nori, F
NEW JOURNAL OF PHYSICS 10: Art. No. 053024 MAY 19 2008

- Significance of the inter-site Coulomb interaction between the O 2p and Cu 3d holes revealed by resonant inelastic x-ray scattering of Sr14Cu24O41
Higashiya, A; Imada, S; Murakawa, T; et al.
NEW JOURNAL OF PHYSICS 10: Art. No. 053033 MAY 28 2008

- Behavioral and gene expression analyse mice as a possible animal model of of Wfs1 knockout mice as a possible animal model moods disorder
Kato, T; Ishiwata, M; Yamada, K; et al.
NEUROSCIENCE RESEARCH 61 (2): 143-158 JUN 2008

- Patent protection and access to genetic resources
Shimbo, I; Ito, Y; Sumikura, K
NATURE BIOTECHNOLOGY 26 (6): 645-647 JUN 2008

- The amphioxus genome and the evolution of the chordate karyotype
Putnam, NH; Butts, T; Ferrier, DEK; et al.
NATURE 453 (7198): 1064-U3 JUN 19 2008

- Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis
Sugiyama, N; Nakagami, H; Mochida, K; et al.
MOLECULAR SYSTEMS BIOLOGY 4: Art. No. 193 MAY 2008

- Role of nitric oxide synthesized by nitric oxide synthase 2 in liver regeneration
Kumamoto, T; Togo, S; Ishibe, A; et al.
LIVER INTERNATIONAL 28 (6): 865-877 JUL 2008

- CD34+CD38+CD19+ as well as CD34+CD38-CD19+ cells are leukemia-initiating cells with self-renewal capacity in human B-precursor ALL
Kong, Y; Yoshida, S; Saito, Y; et al.
LEUKEMIA 22 (6): 1207-1213 JUN 2008

- Human immunodeficiency virus type 1 Vpr binds to the N lobe of the Wee1 kinase domain and enhances kinase activity for Cdc2
Kamata, M; Watanabe, N; Nagaoka, Y; et al.
JOURNAL OF VIROLOGY 82 (12): 5672-5682 JUN 2008

- Electron transfer activation of chromopyrrolic acid by cytochrome P450 En route to the formation of an antitumor indolocarbazole derivative: Theory supports experiment
Wang, Y; Hirao, H; Chen, H; et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 130 (23): 7170-+ JUN 11 2008

- Effect of pressure on colloidal behavior in hydrothermal water
Ghosh, SK; Tsujii, K
JOURNAL OF PHYSICAL CHEMISTRY B 112 (23): 6906-6913 JUN 12 2008

- Rapid crystallization of amorphous silicon utilizing a radio-frequency thermal plasma torch
Haruta, K; Ye, M; Takemura, Y; et al.
JOURNAL OF NON-CRYSTALLINE SOLIDS 354 (19-25): 2333-2336 MAY 1 2008

- Cortical adenylyl cyclase 1 is required for thalamocortical synapse maturation and aspects of layer IV barrel development
Iwasato, T; Inan, M; Kanki, H; et al.
JOURNAL OF NEUROSCIENCE 28 (23): 5931-5943 JUN 4 2008

- Protein structural change upon ligand binding correlates with enzymatic reaction mechanism
Koike, R; Amemiya, T; Ota, M; et al.
JOURNAL OF MOLECULAR BIOLOGY 379 (3): 397-401 JUN 6 2008

- Towards beyond-1 GHz solution NMR: Internal H-2 lock operation in an external current mode
Yanagisawa, Y; Nakagome, H; Hosono, M; et al.
JOURNAL OF MAGNETIC RESONANCE 192 (2): 329-337 JUN 2008

- Simple and highly sensitive assay system for TNFR2-mediated soluble- and transmembrane-TNF activity
Abe, Y; Yoshikawa, T; Kamada, H; et al.
JOURNAL OF IMMUNOLOGICAL METHODS 335 (1-2): 71-78 JUN 1 2008

- Variations in the FTO gene are associated with severe obesity in the Japanese
Hotta, K; Nakata, Y; Matsuo, T; et al.
JOURNAL OF HUMAN GENETICS 53 (6): 546-553 JUN 2008

- Enzymatic characteristics of I213T mutant presenilin-1/gamma-secretase in cell models and knock-in mouse brains - Familial Alzheimer disease-linked mutation impairs gamma-site cleavage of amyloid precursor protein C-terminal fragment beta
Shimojo, M; Sahara, N; Mizoroki, T; et al.
JOURNAL OF BIOLOGICAL CHEMISTRY 283 (24): 16488-16496 JUN 13 2008

- Structural basis of proteolytic activation of L-phenylalanine oxidase from Pseudomonas sp P-501
Ida, K; Kurabayashi, M; Suguro, M; et al.
JOURNAL OF BIOLOGICAL CHEMISTRY 283 (24): 16584-16590 JUN 13 2008

- Multifunction Gd2O3 : Eu nanocrystals produced by solution combustion synthesis: Structural, luminescent, and magnetic characterization
Jacobsohn, LG; Bennett, BL; Muenchausen, RE; et al.
JOURNAL OF APPLIED PHYSICS 103 (10): Art. No. 104303 MAY 15 2008

- Study of optical response of spinel oxide by utilizing IR-THz spectromicroscopy
Shimai, K; Irizawa, A; Sato, K; et al.
INFRARED PHYSICS&TECHNOLOGY 51 (5): 468-469 MAY 2008

- Application of terahertz spectroscopy for character recognition in a medieval manuscript
Fukunagaa, K; Ogawa, Y; Hayashi, S; et al.
IEICE ELECTRONICS EXPRESS 5 (7): 223-228 APR 10 2008

- Spiroethers of German chamomile inhibit production of aflatoxin G(1) and trichothecene mycotoxin by inhibiting cytochrome P450 monooxygenases involved in their biosynthesis
Yoshinari, T; Yaguchi, A; Takahashi-Ando, N; et al.
FEMS MICROBIOLOGY LETTERS 284 (2): 184-190 JUL 2008

- Differential gene expression profiles of red and green forms of Perilla frutescens leading to comprehensive identification of anthocyanin biosynthetic genes
Yamazaki, M; Shibata, M; Nishiyama, Y; et al.
FEBS JOURNAL 275 (13): 3494-3502 JUL 2008

- Somatic cell nuclear transfer: Infinite reproduction of a unique diploid genome
Kishigami, S; Wakayama, S; Hosoi, Y; et al.
EXPERIMENTAL CELL RESEARCH 314 (9): 1945-1950 MAY 15 2008

- Decreased olfactory mucus secretion and nasal abnormality in mice lacking type 2 and type 3 IP3 receptors
Fukuda, N; Shirasu, M; Sato, K; et al.
EUROPEAN JOURNAL OF NEUROSCIENCE 27 (10): 2665-2675 MAY 2008

- Anisotropy in the representation of direction preferences in cat area 18
Ribot, J; Tanaka, S; O'Hashi, K; et al.
EUROPEAN JOURNAL OF NEUROSCIENCE 27 (10): 2773-2780 MAY 2008

- The use of repetitive DNA in cytogenetic studies of plant sex chromosomes
Kazama, Y; Matsunaga, S
CYTOGENETIC AND GENOME RESEARCH 120 (3-4): 247-254 2008

- Precise determination of the first hyperpolarizability of a fluorescent triindole derivative with dicyanovinyl groups by the deconvolution method
Ikeda, S; Kumagai, H; Ooi, H; et al.
CHEMICAL PHYSICS LETTERS 458 (4-6): 337-340 JUN 17 2008

- Hybridization-sensitive on-off DNA probe: Application of the exciton coupling effect to effective fluorescence quenching
Ikeda, S; Okamoto, A
CHEMISTRY-AN ASIAN JOURNAL 3 (6): 958-968 2008

- Origins of a cyanobacterial 6-phosphogluconate dehydrogenase in plastid-lacking eukaryotes
Maruyama, S; Misawa, K; Iseki, M; et al.
BMC EVOLUTIONARY BIOLOGY 8: Art. No. 151 MAY 17 2008

- Generation of functional platelets from human embryonic stem cells in vitro via ES-sacs, VEGF-promoted structures that concentrate hematopoietic progenitors
Takayama, N; Nishikii, H; Usui, J; et al.
BLOOD 111 (11): 5298-5306 JUN 1 2008

- Development of a novel fluorescent probe for fluorescence correlation spectroscopic detection of kinase inhibitors
Kawaguchi, M; Terai, T; Utata, R; et al.
BIOORGANIC&MEDICINAL CHEMISTRY LETTERS 18 (13): 3752-3755 JUL 1 2008

- Synthesis and biological activities of reveromycin A and spirofungin A derivatives
Shimizu, T; Usui, T; Fujikura, M; et al.
BIOORGANIC&MEDICINAL CHEMISTRY LETTERS 18 (13): 3756-3760 JUL 1 2008

- Mass spectrometric and kinetic studies on slow progression of papain-catalyzed polymerization of L-glutamic acid diethyl ester
Narai-Kanayama, A; Koshino, H; Aso, K
BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS 1780 (6): 881-891 JUN 2008

- Solution structure of the second RNA recognition motif (RRM) domain of murine T cell intracellular antigen-1 (TIA-1) and its RNA recognition mode
Kuwasako, K; Takahashi, M; Tochio, N; et al.
BIOCHEMISTRY 47 (24): 6437-6450 JUN 17 2008

- Adding L-lysine derivatives to the genetic code of mammalian cells with engineered pyrrolysyl-tRNA synthetases
Mukai, T; Kobayashi, T; Hino, N; et al.
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 371 (4): 818-822 JUL 11 2008

- Advanced method for high-throughput expression of mutated eukaryotic membrane proteins in Saccharomyces cerevisiae
Ito, K; Sugawara, T; Shiroishi, M; et al.
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 371 (4): 841-845 JUL 11 2008

- Direct observation of interaction between proteins and blood-compatible polymer surfaces
Hayashi, T; Tanaka, M; Yamamoto, S; et al.
BIOINTERPHASES 2 (4): 119-125 DEC 2007

- Terahertz-wave absorption in liquids measured using the evanescent field of a silicon waveguide
Cheng, L; Hayashi, S; Dobroiu, A; et al.
APPLIED PHYSICS LETTERS 92 (18): Art. No. 181104 MAY 5 2008

- 227 nm AlGaN light-emitting diode with 0.15 mW output power realized using a thin quantum well and AIN buffer with reduced threading dislocation density
Hirayama, H; Noguchi, N; Yatabe, T; et al.
APPLIED PHYSICS EXPRESS 1 (5): Art. No. 051101 MAY 2008

- Observation of quantum level spectrum for silicon double single-electron transistors
Kawata, Y; Yamaguchi, T; Ishibashi, K; et al.
APPLIED PHYSICS EXPRESS 1 (5): Art. No. 051401 MAY 2008

- N-(Fluoren-9-ylmethoxycarbonyl)-L-leucine
Yamada, K; Hashizume, D; Shimizu, T
ACTA CRYSTALLOGRAPHICA SECTION E-STRUCTURE REPORTS ONLINE 64: O1112-U2456 Part 6 JUN 2008

- Structure of an N-terminally truncated selenophosphate synthetase from Aquifex aeolicus
Matsumoto, E; Sekine, S; Akasaka, R; et al.
ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY AND CRYSTALLIZATION COMMUNICATIONS 64: 453-458 Part 6 JUN 2008

- Crystallization screening test for the whole-cell project on Thermus thermophilus HB8
Iino, H; Naitow, H; Nakamura, Y; et al.
ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY AND CRYSTALLIZATION COMMUNICATIONS 64: 487-491 Part 6 JUN 2008

- Crystallization and preliminary X-ray crystallographic analysis of full-length yeast tropomyosin 2 from Saccharomyces cerevisiae
Meshcheryakov, V; Nitanai, Y; Maytum, R; et al.
ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY AND CRYSTALLIZATION COMMUNICATIONS 64: 528-530 Part 6 JUN 2008

- Purification, crystallization and preliminary X-ray diffraction analysis of the putative ABC transporter ATP-binding protein from Thermotoga maritima
Ethayathulla, AS; Bessho, Y; Shinkai, A; et al.
ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY AND CRYSTALLIZATION COMMUNICATIONS 64: 498-500 Part 6 JUN 2008

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