Research Summary

Selected Publications

Papers with an asterisk(*) are based on research conducted outside of RIKEN.

• 1. Takahashi, Y., Ueki, M., Yamada, M., Tamiya, G., Motoike, I.N., Saigusa, D., Sakurai, M., Nagami, F., Ogishima, S., Koshiba, S., Kinoshita, K., Yamamoto, M., and Tomita, H.:
  "Improved metabolomic data-based prediction of depressive symptoms using nonlinear machine learning with feature selection"
  Translational Psychiatry 10(1): 157 (2020)
• 2. Yamamoto, Y., Tsuzuki, T., Akatsuka, J., Ueki, M., Morikawa, H., Numata, Y., Takahara, T., Tsuyuki, T., Tsutsumi, K., Nakazawa, R., Shimizu, A., Maeda, I., Tsuchiya, S., Kanno, H., Kondo, Y., Fukumoto, M., Tamiya, G., Ueda, N., and Kimura, G.:
  "Automated acquisition of explainable knowledge from unannotated histopathology images"
  Nature Communications 10: 5642 (2019)
• 3. Yano, K., Morinaka, Y., Wang, F., Huang, P., Takehara, S., Hirai, T., Ito, A., Koketsu, E., Kawamura, M., Kotake, K., Yoshida, S., Endo, M., Tamiya, G., Kitano, H., Ueguchi-Tanaka, M., Hirano, K., and Matsuoka, M.:
  "GWAS with principal component analysis identifies a gene comprehensively controlling rice architecture"
  Proceedings of the National Academy of Sciences of the United States of America 116(42): 21262-21267 (2019)
• 4. Sakurai, R., Ueki, M., Makino, S., Hozawa, A., Kuriyama, S., Takai-Igarashi, T., Kinoshita, K., Yamamoto, M., and Tamiya, G.:
  "Outlier detection for questionnaire data in biobanks"
  International Journal of Epidemiology 48(4): 1305-1315 (2019)
• 5. *Araki ,Y., Awakawa, T., Matsuzaki, M., Cho, R., Matsuda, Y., Hoshino, S., Shinohara, Y., Yamamoto, M., Kido, Y., Inaoka, D.K., Nagamune, K., Ito, K., Abe, I., and Kita, K.:
  "Complete biosynthetic pathways of ascofuranone and ascochlorin in Acremonium egyptiacum"
  Proceedings of the National Academy of Sciences of the United States of America 116(17): 8269-8274 (2019)
• 6. Kuroha, T., Nagai, K., Gamuyao, R., Wang, D.R., Furuta, T., Nakamori, M., Kitaoka, T., Adachi, K., Minami, A., Mori, Y., Mashiguchi, K., Seto, Y., Yamaguchi, S., Kojima, M., Sakakibara, H., Wu, J., Ebana, K., Nobutaka, M., Ohme-Takagi, M., Yanagisawa, S., Yamasaki, M., Yokoyama, R., Nishitani, K., Mochizuki, T., Tamiya, G., McCouch, S.R., and Ashikari, M.:
  "Ethylene-gibberellin signaling underlies adaptation of rice to periodic flooding"
  Science 361(6398): 181-186 (2018)
• 7. *Ueki, M., and Tamiya, G.:
  "Smooth-threshold multivariate genetic prediction with unbiased model selection"
  Genetic Epidemiology 40(3): 233-243 (2016)
• 8. *Kuriyama, S., Yaegashi, N., et al. (Tamiya, G.; 11th in 58 authors):
  "The Tohoku Medical Megabank Project: Design and Mission"
  Journal of Epidemiology 26(9): 493–511 (2016)
• 9. *Tamiya, G., Makino, S., Hayashi, M., Abe, A., Numakura, C., Ueki, M., Tanaka, A., Ito, C., Toshimori, K., Ogawa, N., Terashima, T., Maegawa, H., Yanagisawa, D., Tooyama, I., Tada, M., Onodera, O., and Hayasaka, K.:
  "A mutation of COX6A1 causes a recessive axonal or mixed form of Charcot-Marie-Tooth disease"
  American Journal of Human Genetics 95(3): 294-300 (2014)
• 10. *Ueki, M., and Tamiya, G.:
  "Ultrahigh-dimensional variable selection method for whole-genome gene-gene interaction analysis"
  BMC Bioinformatics 13(1): 72 (2012)

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Email: gen.tamiya [at] riken.jp