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RIKEN Center for Biosystems Dynamics Research Laboratory for Nutritional Biology

Team Director: Fumiaki Obata (Ph.D.)

Research Summary

Fumiaki Obata (Ph.D.)

The organismal healthspan is significantly influenced by the quality and quantity of the diet, but our understanding of the detailed molecular mechanisms remains limited. Diet contributes to the metabolic and physiological homeostasis of animals directly as nutrients or indirectly via gut microbiome, but a detailed understanding of the molecular mechanisms is lacking. In our laboratory, we study the physiological functions of various nutrients and gut bacteria during each life stage, including development, growth, reproduction, and aging, as well as the adaptation mechanisms of animals to nutritional over- and undernutrition. We are also trying to elucidate the mechanisms by which transient dietary intake during development and development influences health status throughout life.

Main Research Fields

  • Biology

Related Research Fields

  • Agricultural Sciences
  • Biological Sciences
  • Medicine, Dentistry & Pharmacy
  • Environmental physiology
  • Developmental biology
  • Biological pharmacy

Keywords

  • Nutrition
  • Lifespan
  • Gut microbiota
  • Metabolism
  • Innate Immunity

Selected Publications

  • 1. Oi A, Obata F.
    "Nutrient sensing and signalling of specific amino acids: Insights from Drosophila study."
    Current Opinion in Cell Biology (2025) doi: 10.1016/j.ceb.2025.102547
  • 2. Fujita Y, Ishibuchi T, Uematsu A, et al.
    "Manipulating dietary protein and amino acids in the common marmoset Callithrix jacchus impacts circulating metabolites and FGF21 levels."
    Scientific Reports 15 , 31055 (2025) doi: 10.1038/s41598-025-16749-0
  • 3. Oi A, Shinoda N, Nagashima S, et al.
    "A nonsecretory antimicrobial peptide mediates inflammatory organ damage in Drosophila renal tubules"
    Cell Reports 44(1), 115082 (2025) doi: 10.1016/j.celrep.2024.115082
  • 4. Obata F, Miura M.
    "Regulatory Mechanisms of Aging Through the Nutritional and Metabolic Control of Amino Acid Signaling in Model Organisms."
    Annual Review of Genetics 58, (2024) doi: 10.1146/annurev-genet-111523-102042
  • 5. Kosakamoto H, Sakuma C, Okada R, et al.
    "Context-dependent impact of the dietary non-essential amino acid tyrosine on Drosophila physiology and longevity."
    Science Advances 10(35), eadn7167 (2024) doi: 10.1126/sciadv.adn7167
  • 6. Kosakamoto H, Miura M, Obata F.
    "Epidermal tyrosine catabolism is crucial for metabolic homeostasis and survival against high-protein diets in Drosophila."
    Development 151(1), dev202372 (2024) doi: 10.1242/dev.202372
  • 7. Kosakamoto H, Obata F, Kuraishi J, et al.
    "Early-adult methionine restriction reduces methionine sulfoxide and extends lifespan in Drosophila."
    Nature Communications 14(1), 7832 (2023) doi: 10.1038/s41467-023-43550-2
  • 8. Onuma T, Yamauchi T, Kosakamoto H, et al.
    "Recognition of commensal bacterial peptidoglycans defines Drosophila gut homeostasis and lifespan."
    PLOS Genetics 19(4), e1010709 (2023) doi: 10.1371/journal.pgen.1010709
  • 9. Kosakamoto H, Okamoto N, Aikawa H, et al.
    "Sensing of the non-essential amino acid tyrosine governs the response to protein restriction in Drosophila."
    Nature Metabolism 4(7), 944-959 (2022) doi: 10.1038/s42255-022-00608-7

Recent Research Results

Related Links

Lab Members

Principal investigator

Fumiaki Obata
Team Director

Core members

Ayano Oi
Postdoctoral Researcher
Yusuke Kato
Student Trainee
Yuka Fujita
Student Trainee
Souto Kitazawa
Student Trainee
Miyu Kubota
Student Trainee
Ayako Matoba
Technical Staff I
Rina Okada
Technical Staff I
Katsura Tomioka
Research Part-time Worker II
Mari Shoji
Assistant
Tadashi Uemura
Senior Visiting Scientist
Hina Kosakamoto
Visiting Scientist

Contact Information

Developmental Biology Buildings A N705
2-2-3 Minatojima-minamimachi, Chuo-ku, Kobe, Hyogo 650-0047
Tel: +81-(0)7-8306-3368
Email: fumiaki.obata@riken.jp

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