Research Summary

Selected Publications

• 1.A. Sakane, S. Yoshizawa, M. Nishimura, Y. Tsuchiya, N. Matsushita, K. Miyake, K. Horikawa, I. Imoto, C. Mizuguchi, H. Saito, T. Ueno, S. Matsushita, H. Haga, S. Deguchi, K. Mizuguchi, H. Yokota, T. Sasaki,
  "Conformational plasticity of JRAB/MICAL-L2 provides 'law and order' in collective cell migration",
  Article in Molecular Biology of the Cell, 27, 3095-3108, August 2016, DOI: 10.1091/mbc.E16-05-0332
• 2.N. Yamashita, M. Morita, W. R. Legant, B.-C. Chen, E. Betzig, H. Yokota, and Y. Mimori-Kiyosue, "Three-dimensional tracking of plus-tips by lattice light-sheet microscopy permits the quantification of microtubule growth trajectories within the mitotic apparatus",
  J. Biomedical Optics, 20(10):101206:1-18, 2015.
• 3.T. Ijiri, S. Yoshizawa, H. Yokota, and T. Igarashi,
  "Flower Modeling via X-ray Computed Tomography",
  ACM Transactions on Graphics, Vol. 33(4):48:1-10, (Proc. of SIGGRAPH'14), 2014.
• 4.M. Morita, T. Tawara, M. Nishimura, S. Yoshizawa, B. Chou, I. Kuroki, T. Ijiri, Y. Tsujimura, R. Himeno, and H. Yokota,
  "Communication Platform for Image Analysis and Sharing in Biology",
  International Journal of Networking and Computing, Vol. 4, No. 2, pp. 369-391, 2014.
• 5.E. A. Susaki, K. Tainaka, D. Perrin, F. Kishino, T. Tawara, T. M. Watanabe, C. Yokoyama, H. Onoe, M. Eguchi, S. Yamaguchi, T. Abe, H. Kiyonari, Y. Shimizu, A. Miyawaki, H. Yokota, and H. R. Ueda,
  "Whole-Brain Imaging with Single-Cell Resolution Using Chemical Cocktails and Computational Analysis", Cell, Vol. 157(3), pp. 726-739, 2014.
• 6.T. Ijiri, S. Yoshizawa, Y. Sato, M. Ito, and H. Yokota:
  "Bilateral Hermite Radial Basis Functions for Contour-based Volume Segmentation"
  Computer Graphics Forum (Proc. of EUROGRAPHICS’13), Vo. 32(2), pp. 123-132, 2013.
• 7.S. Hihara, C.-G. Pack, K. Kaizu, T. Tani, T. Hanafusa, T. Nozaki, S. Takemoto, T. Yoshimi, H. Yokota, N. Imamoto, Y. Sako, M. Kinjo, K. Takahashi, T. Nagai, and K. Maeshima:
  "Local Nucleosome Dynamics Facilitate Chromatin Accessibility in Living Mammalian Cells"
  Cell Reports, Vol. 2(6), pp. 1645-1656, 2012.
• 8.S. Yoshizawa, A. Belyaev, and H. Yokota:
  "Shape and Image Interrogation with Curvature Extremalities"
  Journal for Geometry and Graphics, Vol. 16, No. 1, pp. 81-95, 2012.
• 9.Y. Okamura-Oho, K. Shimokawa, S. Takemoto, A. Hirakiyama, S. Nakamura, Y. Tsujimura, M. Nishimura, T. Kasukawa, K. Masumoto, I. Nikaido, Y. Shigeyoshi, H. Ueda, G. Song, J. Gee, R. Himeno, and H. Yokota:
  "Transcriptome tomography for brain analysis in the web-accessible anatomical space"
  PLOS ONE, Vol. 7(9), e45373:1-10, 2012.
• 10.T. Ijiri, T. Ashihara, N. Umetani, T. Igarashi, R. Haraguchi, H. Yokota, and K. Nakazawa:
  "A Kinematic Approach for Efficient and Robust Simulation of the Cardiac Beating Motion"
  PLoS ONE, Vol. 7(5), pp. e36706:1-9, 2012

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