RIKEN Center for Biosystems Dynamics Research Laboratory for Brain Connectomics Imaging
Team Director: Takuya Hayashi (M.D., Ph.D.)
Research Summary

Our laboratory focuses on developing non-invasive, high-precision MRI technology to elucidate brain function, structure, and connectivity in humans and non-human primates. We are creating standard brain templates and atlases utilizing multi-scale and multi-modal brain imaging data to develop essential brain maps for neuroscience research. Furthermore, we investigate the relationships between microscale phenomena (such as genetic polymorphisms, gene expression, and neural activity) and individual-level phenomena (including developmental environment and individual behavior). Through these multi-scale observations, we aim to understand and predict individual behavior.
Research Subjects:
- Reorganization of brain network in plasticity
- Reorganization of brain network in regeneration
- Transformation and control of brain network in brain disease
- Sociality, brain network and neurotransmitter
Main Research Fields
- Biology
Related Research Fields
- Engineering
- Complex Systems
- Social Sciences
- Biological Sciences
- Medicine, Dentistry & Pharmacy
- Brain sciences and related fields
- Neuroscience and related fields
- General internal medicine and related fields
Keywords
- Neuroscience
- Imaging
- Brain imaging and connectome analysis
- MRI
Selected Publications
- 1.
Autio, J.A., Kimura., I, Ose, T., Matsumoto, T., Ohno. M., Urushibata,Y., Ikeda, T., Glasser, M.F., Van Essen. D.C.,Hayashi, T.:
"Mapping Vascular Network Architecture in Primate Brain Using Ferumoxytol-Weighted Laminar MRI"
eLife, 2024 (in press) - 2.
Ikeda, T., Autio, J.A., Kawasaki, A., Takeda, C., Ose, T., Takada, M., Van Essen, D. C., Glasser, M. F., and Hayashi, T.:
"Cortical adaptation of the night monkey to a nocturnal niche environment: a comparative non-invasive T1w/T2w myelin study"
Brain Struct. Funct., (2022) - 3.
Ose, T., Autio, J.A., Ohno, M., Stephen, F., Uematsu, A., Kawasaki, A., Takeda, C., Hori, Y., Nishigori, K., Nakako, T., Yokoyama, C., Nagata, H., Yamamori, T., Van Essen, D. C., Glasser, M.F., Watabe, H., and Hayashi, T.
"Anatomical variability, multi-modal coordinate systems, and precision targeting in the marmoset brain"
Neuroimage 250, 118965–118965, (2022) - 4.
Hayashi, T., Hou, Y., Glasser, M.F., et al.
"The nonhuman primate neuroimaging and neuroanatomy project"
NeuroImage 229, 117726. (2021) - 5.
Koike, S., Tanaka, S., Okada, T., et al.
"Brain/MINDS Beyond Human Brain MRI Project: A Protocol for Multi-level Harmonization across Brain Disorders Throughout the Lifespan"
NeuroImage:Clinical (2021) - 6.
Fukutomi H, Glasser MF, Zhang H, et al.
"Neurite imaging reveals microstructural variations in human cerebral cortical gray matter"
Neuroimage S1053-8119(18). 30105-8 (2018) - 7.
Van Essen, D.C., Donahue, C.J., Coalson, T.S., et al.
"Cerebral cortical folding, parcellation, and connectivity in humans, nonhuman primates, and mice."
Proceedings of the National Academy of Sciences of the United States of America 116(52):26173-26180 (2019) - 8.
Kikuchi T, Morizane A, Doi D, et al.
"Human iPS cell-derived dopaminergic neurons function in a primate Parkinson’s disease model."
Nature 548. 592–596 (2017) - 9.
Hayashi T, Ko JH, Strafella AP, Dagher A.:
"Dorsolateral prefrontal and orbitofrontal cortex interactions during self-control of cigarette craving."
Proceedings of the National Academy of Sciences of the United States of America 110(11). 4422-4427 (2013) - 10.
Hayashi T, Wakao S, Kitada M, et al.
"Autologous mesenchymal stem cell-derived dopaminergic neurons function in parkinsonian macaques."
Journal of Clinical Investigation 123(1). 272-284 (2013)
Recent Research Results
Mar. 6, 2025
Monkey brain map reveals the importance of sightMay 18, 2020
A new biomarker for the aging brain
Related Links
Lab Members
Principal investigator
- Takuya Hayashi
- Team Director
Core members
- Toshihiko Aso
- Deputy Team Director
- Takuro Ikeda
- Research Scientist
- Akiko Uematsu
- Research Scientist
- Naofumi Yoshida
- Research Associate
- Takayuki Ose
- Technical Scientist
- Takashi Azuma
- Technical Scientist
- Masahiro Ohno
- Expert Technician
- Tomoko Ishibuchi
- Technical Staff I
- Reiko Kobayashi
- Technical Staff I
- Tomoko Oyanagi
- Assistant
- Natsuko Kashida
- Research Part-time Worker I
- Rei Hashimoto
- Student Trainee
- Arihito Nauchi
- Student Trainee
Contact Information
MI R&D Center
6-7-3 Minatojima-minamimachi, Chuo-ku, Kobe, Hyogo
650-0047, Japan
Email: takuya.hayashi@riken.jp