12月13日-12月19日

Published Research Papers of RIKEN Researchers
total number of papers: 55

• Direct Observation of Pressure-induced Yb Valence Transition in YbInCu4
  Author(s): Yamaoka, Hitoshi; Ohmura, Ayako; Furue, Yusaku; Tsujii, Naohito; Ishii, Hirofumi; Hiraoka, Nozomu
  Source: JOURNAL OF THE PHYSICAL SOCIETY OF JAPAN,90(12): DEC 15, 2021
  DOI: 10.7566/JPSJ.90.124801
• Silencing and activating anergic B cells*
  Author(s): Tanaka, Shinya; Ise, Wataru; Baba, Yoshihiro; Kurosaki, Tomohiro
  Source: IMMUNOLOGICAL REVIEWS: DEC 14, 2021
  DOI: 10.1111/imr.13053
• Biomolecular condensates in cancer biology
  Author(s): Suzuki, Hiroshi, I; Onimaru, Koh
  Source: CANCER SCIENCE,113(2): FEB, 2022
  DOI: 10.1111/cas.15232
• Eulerian finite volume formulation using Lagrangian marker particles for incompressible fluid-structure interaction problems
  Author(s): Shimada, Tokimasa; Nishiguchi, Koji; Bale, Rahul; Okazawa, Shigenobu; Tsubokura, Makoto
  Source: INTERNATIONAL JOURNAL FOR NUMERICAL METHODS IN ENGINEERING,123(5): MAR 15, 2022
  DOI: 10.1002/nme.6896
• Quantum anomalous Hall effect with a permanent magnet defines a quantum resistance standard
  Author(s): Okazaki, Yuma; Oe, Takehiko; Kawamura, Minoru; Yoshimi, Ryutaro; Nakamura, Shuji; Takada, Shintaro; et al.
  Source: NATURE PHYSICS,18(1): JAN, 2022
  DOI: 10.1038/s41567-021-01424-8
• Enhanced synchronization between prelimbic and infralimbic cortices during fear extinction learning
  Author(s): Watanabe, Mayumi; Uematsu, Akira; Johansen, Joshua P.
  Source: MOLECULAR BRAIN,14(1): DEC 11, 2021
  DOI: 10.1186/s13041-021-00884-6
• Detailed investigation of two high-speed evolved Galactic stars
  Author(s): Matas Pinto, Aroa del Mar; Caffau, Elisabetta; Francois, Patrick; Spite, Monique; Bonifacio, Piercarlo; Wanajo, Shinya; et al.
  Source: ASTRONOMISCHE NACHRICHTEN: DEC 9, 2021
  DOI: 10.1002/asna.20210032
• The power of genetic diversity in genome-wide association studies of lipids
  Author(s): Graham, Sarah E.; Clarke, Shoa L.; Wu, Kuan-Han H.; Kanoni, Stavroula; Zajac, Greg J. M.; Ramdas, Shweta; et al.
  Source: NATURE,600(7890): DEC 23, 2021
  DOI: 10.1038/s41586-021-04064-3
• Biphasic activation of beta-arrestin 1 upon interaction with a GPCR revealed by methyl-TROSY NMR
  Author(s): Shiraishi, Yutaro; Kofuku, Yutaka; Ueda, Takumi; Pandey, Shubhi; Dwivedi-Agnihotri, Hemlata; Shukla, Arun K.; et al.
  Source: NATURE COMMUNICATIONS,12(1): DEC 9, 2021
  DOI: 10.1038/s41467-021-27482-3
• B1-type cyclins control microtubule organization during cell division in Arabidopsis
  Author(s): Romeiro Motta, Mariana; Zhao, Xin'Ai; Pastuglia, Martine; Belcram, Katia; Roodbarkelari, Farshad; Komaki, Maki; et al.
  Source: EMBO REPORTS,23(1): JAN 5, 2022
  DOI: 10.15252/embr.202153995
• Nickel-Catalyzed Reductive Allyl-Aryl Cross-Electrophile Coupling via Allylic C-F Bond Activation
  Author(s): Fujita, Takeshi; Kobayashi, Yutaro; Takahashi, Ikko; Morioka, Ryutaro; Ichitsuka, Tomohiro; Ichikawa, Junji
  Source: CHEMISTRY-A EUROPEAN JOURNAL,28(2): JAN 10, 2022
  DOI: 10.1002/chem.202103643
• Bacterial cancer therapy in autochthonous colorectal cancer affects tumor growth and metabolic landscape
  Author(s): Mackie, Gillian M.; Copland, Alastair; Takahashi, Masumi; Nakanishi, Yumiko; Everard, Isabel; Kato, Tamotsu; et al.
  Source: JCI INSIGHT,6(23): DEC 8, 2021
  DOI: 10.1172/jci.insight.139900
• eIF2B-capturing viral protein NSs suppresses the integrated stress response
  Author(s): Kashiwagi, Kazuhiro; Shichino, Yuichi; Osaki, Tatsuya; Sakamoto, Ayako; Nishimoto, Madoka; Takahashi, Mari; et al.
  Source: NATURE COMMUNICATIONS,12(1): DEC 7, 2021
  DOI: 10.1038/s41467-021-27337-x
• Implementation of disequilibrium chemistry to spectral retrieval code ARCiS and application to 16 exoplanet transmission spectra Indication of disequilibrium chemistry for HD 209458b and WASP-39b
  Author(s): Kawashima, Yui; Min, Michiel
  Source: ASTRONOMY & ASTROPHYSICS,656: DEC 7, 2021
  DOI: 10.1051/0004-6361/202141548
• An electrically coupled pioneer circuit enables motor development via proprioceptive feedback in Drosophila embryos
  Author(s): Zeng, Xiangsunze; Komanome, Yuko; Kawasaki, Tappei; Inada, Kengo; Jonaitis, Julius; Pulver, Stefan R.; et al.
  Source: CURRENT BIOLOGY,31(23): DEC 6, 2021
  DOI: 10.1016/j.cub.2021.10.005
• Whole gut virome analysis of 476 Japanese revealed a link between phage and autoimmune disease
  Author(s): Tomofuji, Yoshihiko; Kishikawa, Toshihiro; Maeda, Yuichi; Ogawa, Kotaro; Nii, Takuro; Okuno, Tatsusada; et al.
  Source: ANNALS OF THE RHEUMATIC DISEASES,81(2): FEB, 2022
  DOI: 10.1136/annrheumdis-2021-221267
• A unique leucine-valine adhesive motif supports structure and function of protein disulfide isomerase P5 via dimerization
  Author(s): Okumura, Masaki; Kanemura, Shingo; Matsusaki, Motonori; Kinoshita, Misaki; Saio, Tomohide; Ito, Dai; et al.
  Source: STRUCTURE,29(12): DEC 2, 2021
  DOI: 10.1016/j.str.2021.03.016
• Revisiting the former nuclear emulsion data for hypertriton
  Author(s): Liu, E.; Kasagi, A.; Ekawa, H.; Nakagawa, M.; Saito, T. R.; Yoshida, J.
  Source: EUROPEAN PHYSICAL JOURNAL A,57(12): DEC, 2021
  DOI: 10.1140/epja/s10050-021-00649-8
• Effects of the Nuclear Equation of State on Type I X-Ray Bursts: Interpretation of the X-Ray Bursts from GS 1826-24
  Author(s): Dohi, A.; Nishimura, N.; Hashimoto, M.; Matsuo, Y.; Noda, T.; Nagataki, S.
  Source: ASTROPHYSICAL JOURNAL,923(1): DEC, 2021
  DOI: 10.3847/1538-4357/ac2821
• Artifact removal in the contour areas of SAXS-CT images by Tikhonov-L1 minimization
  Author(s): Ogawa, Hiroki; Ono, Shunsuke; Watanabe, Yuki; Nishikawa, Yukihiro; Nishitsuji, Shotaro; Kabe, Taizo; et al.
  Source: JOURNAL OF APPLIED CRYSTALLOGRAPHY,54: DEC, 2021
  DOI: 10.1107/S1600576721011523
• Discovery of 40.5 ks Hard X-Ray Pulse-phase Modulations from SGR 1900+14
  Author(s): Makishima, K.; Tamba, T.; Aizawa, Y.; Odaka, H.; Yoneda, H.; Enoto, T.; et al.
  Source: ASTROPHYSICAL JOURNAL,923(1): DEC, 2021
  DOI: 10.3847/1538-4357/ac28fd
• Search for Very High-energy Emission from the Millisecond Pulsar PSR J0218+4232
  Author(s): Acciari, V. A.; Ansoldi, S.; Antonelli, L. A.; Engels, A. Arbet; Artero, M.; Asano, K.; et al.
  Source: ASTROPHYSICAL JOURNAL,922(2): DEC, 2021
  DOI: 10.3847/1538-4357/ac20d7
• Autonomous epithelial folding induced by an intracellular mechano-polarity feedback loop
  Author(s): Wen, Fu-Lai; Kwan, Chun Wal; Wang, Yu-Chiun; Shibata, Tatsuo
  Source: PLOS COMPUTATIONAL BIOLOGY,17(12): DEC, 2021
  DOI: 10.1371/journal.pcbi.1009614
• Coagulation Instability in Protoplanetary Disks: A Novel Mechanism Connecting Collisional Growth and Hydrodynamical Clumping of Dust Particles
  Author(s): Tominaga, Ryosuke T.; Inutsuka, Shu-ichiro; Kobayashi, Hiroshi
  Source: ASTROPHYSICAL JOURNAL,923(1): DEC, 2021
  DOI: 10.3847/1538-4357/ac173a
• Three-body crossover from a Cooper triple to a bound trimer state in three-component Fermi gases near a triatomic resonance
  Author(s): Tajima, Hiroyuki; Tsutsui, Shoichiro; Doi, Takahiro M.; Iida, Kei
  Source: PHYSICAL REVIEW A,104(5): NOV 30, 2021
  DOI: 10.1103/PhysRevA.104.053328
• Kondo effect with Wilson fermions
  Author(s): Ishikawa, Tsutomu; Nakayama, Katsumasa; Suzuki, Kei
  Source: PHYSICAL REVIEW D,104(9): NOV 29, 2021
  DOI: 10.1103/PhysRevD.104.094515
• Superconductor/normal-metal/superconductor junction of topological superconductors revisited: Fractional Josephson current, fermion parity, and oscillating wave functions
  Author(s): Sumita, Shuntaro; Furusaki, Akira
  Source: PHYSICAL REVIEW B,104(20): NOV 29, 2021
  DOI: 10.1103/PhysRevB.104.205431
• Derivedness Index for Estimating Degree of Phenotypic Evolution of Embryos: A Study of Comparative Transcriptomic Analyses of Chordates and Echinoderms
  Author(s): Leong, Jason Cheok Kuan; Li, Yongxin; Uesaka, Masahiro; Uchida, Yui; Omori, Akihito; Hao, Meng; et al.
  Source: FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY,9: NOV 26, 2021
  DOI: 10.3389/fcell.2021.749963
• Vector Auto-Regressive Deep Neural Network: A Data-Driven Deep Learning-Based Directed Functional Connectivity Estimation Toolbox
  Author(s): Okuno, Takuto; Alexander Woodward Alzheimer's Dis Neuroimaging Initiative, Alexander
  Source: FRONTIERS IN NEUROSCIENCE,15: NOV 23, 2021
  DOI: 10.3389/fnins.2021.764796
• Probing early-time longitudinal dynamics with the Lambda hyperon's spin polarization in relativistic heavy-ion collisions
  Author(s): Ryu, Sangwook; Jupic, Vahidin; Shen, Chun
  Source: PHYSICAL REVIEW C,104(5): NOV 23, 2021
  DOI: 10.1103/PhysRevC.104.054908
• g(T)(x) contribution to single spin asymmetries in SIDIS
  Author(s): Benie, Sanjin; Hatta, Yoshitaka; Kaushik, Abhiram; Li, Hsiang-Nan
  Source: PHYSICAL REVIEW D,104(9): NOV 18, 2021
  DOI: 10.1103/PhysRevD.104.094027
• Optical polarimetric measurement of surface acoustic waves
  Author(s): Taga, K.; Hisatomi, R.; Ohnuma, Y.; Sasaki, R.; Ono, T.; Nakamura, Y.; et al.
  Source: APPLIED PHYSICS LETTERS,119(18): NOV 1, 2021
  DOI: 10.1063/5.0066362
• Siblings with MAN1B1-CDG Showing Novel Biochemical Profiles
  Author(s): Okamoto, Nobuhiko; Ohto, Tatsuyuki; Enokizono, Takashi; Wada, Yoshinao; Kohmoto, Tomohiro; Imoto, Issei; et al.
  Source: CELLS,10(11): NOV, 2021
  DOI: 10.3390/cells10113117
• Smad2 and Smad3 expressed in skeletal muscle promote immobilization-induced bone atrophy in mice
  Author(s): Umezu, Taro; Nakamura, Satoshi; Sato, Yuiko; Kobayashi, Tami; Ito, Eri; Abe, Takaya; et al.
  Source: BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS,582: DEC 10, 2021
  DOI: 10.1016/j.bbrc.2021.10.043
• The role of IL-4 derived from follicular helper T (T-FH) cells and type 2 helper T (T(H)2) cells
  Author(s): Kubo, Masato
  Source: INTERNATIONAL IMMUNOLOGY,33(12): DEC, 2021
  DOI: 10.1093/intimm/dxab080
• Natural tetramic acids elicit multiple inhibitory actions against mitochondrial machineries presiding over oxidative phosphorylation
  Author(s): Unten, Yufu; Murai, Masatoshi; Sakai, Katsuyuki; Asami, Yukihiro; Yamamoto, Takenori; Masuya, Takahiro; et al.
  Source: BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY,85(12): DEC, 2021
  DOI: 10.1093/bbb/zbab176
• CRISPR/Cas9-mediated disruption of the PYRROLIDINE KETIDE SYNTHASE gene reduces the accumulation of tropane alkaloids in Atropa belladonna hairy roots
  Author(s): Hasebe, Fumihito; Yuba, Honoka; Hashimoto, Takashi; Saito, Kazuki; Funa, Nobutaka; Shoji, Tsubasa
  Source: BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY,85(12): DEC, 2021
  DOI: 10.1093/bbb/zbab165
• Plasma cell generation during T-cell-dependent immune responses
  Author(s): Ise, Wataru; Kurosaki, Tomohiro
  Source: INTERNATIONAL IMMUNOLOGY,33(12): DEC, 2021
  DOI: 10.1093/intimm/dxab071
• Long-term prognosis and genetic background of cardiomyopathy in 223 pediatric mitochondrial disease patients
  Author(s): Imai-Okazaki, Atsuko; Matsunaga, Ayako; Yatsuka, Yukiko; Nitta, Kazuhiro R.; Kishita, Yoshihito; Sugiura, Ayumu; et al.
  Source: INTERNATIONAL JOURNAL OF CARDIOLOGY,341: OCT 15, 2021
  DOI: 10.1016/j.ijcard.2021.06.042
• The discovery of group 2 innate lymphoid cells has changed the concept of type 2 immune diseases
  Author(s): Kobayashi, Tetsuro; Motomura, Yasutaka; Moro, Kazuyo
  Source: INTERNATIONAL IMMUNOLOGY,33(12): DEC, 2021
  DOI: 10.1093/intimm/dxab063
• Reciprocal regulation of IgA and the gut microbiota: a key mutualism in the intestine
  Author(s): Takeuchi, Tadashi; Ohno, Hiroshi
  Source: INTERNATIONAL IMMUNOLOGY,33(12): DEC, 2021
  DOI: 10.1093/intimm/dxab049
• Functional genetics for studying the human immune system
  Author(s): Yamamoto, Kazuhiko; Suzuki, Akari; Guerrini, Matteo Maurizio
  Source: INTERNATIONAL IMMUNOLOGY,33(12): DEC, 2021
  DOI: 10.1093/intimm/dxab046
• Toward the development of defined microbial therapeutics
  Author(s): Li, Youxian; Honda, Kenya
  Source: INTERNATIONAL IMMUNOLOGY,33(12): DEC, 2021
  DOI: 10.1093/intimm/dxab038
• Transcriptome Dynamics of Epidermal Reprogramming during Direct Shoot Regeneration in Torenia fournieri
  Author(s): Morinaka, Hatsune; Mamiya, Akihito; Tamaki, Hiroaki; Iwamoto, Akitoshi; Suzuki, Takamasa; Kawamura, Ayako; et al.
  Source: PLANT AND CELL PHYSIOLOGY,62(8): AUG, 2021
  DOI: 10.1093/pcp/pcab101
• SIRIUS project. III. Star-by-star simulations of star cluster formation using a direct N-body integrator with stellar feedback
  Author(s): Fujii, Michiko S.; Saitoh, Takayuki R.; Hirai, Yutaka; Wang, Long
  Source: PUBLICATIONS OF THE ASTRONOMICAL SOCIETY OF JAPAN,73(4): AUG, 2021
  DOI: 10.1093/pasj/psab061
• Closure relations during the plateau emission of Swift GRBs and the fundamental plane
  Author(s): Dainotti, Maria Giovanna; Lenart, Aleksander L.; Fraija, Nissim; Nagataki, Shigehiro; Warren, Donald C.; De Simone, Biagio; et al.
  Source: PUBLICATIONS OF THE ASTRONOMICAL SOCIETY OF JAPAN,73(4): AUG, 2021
  DOI: 10.1093/pasj/psab057
• An analytical density profile of dense circumstellar medium in Type II supernovae
  Author(s): Tsuna, Daichi; Takei, Yuki; Kuriyama, Naoto; Shigeyama, Toshikazu
  Source: PUBLICATIONS OF THE ASTRONOMICAL SOCIETY OF JAPAN,73(4): AUG, 2021
  DOI: 10.1093/pasj/psab063
• GFS9 Affects Piecemeal Autophagy of Plastids in Young Seedlings of Arabidopsis thaliana
  Author(s): Ishida, Hiroyuki; Okashita, Yu; Ishida, Hiromi; Hayashi, Makoto; Izumi, Masanori; Makino, Amane; et al.
  Source: PLANT AND CELL PHYSIOLOGY,62(9): SEP, 2021
  DOI: 10.1093/pcp/pcab084
• SIRIUS project. I. Star formation models for star-by-star simulations of star clusters and galaxy formation
  Author(s): Hirai, Yutaka; Fujii, Michiko S.; Saitoh, Takayuki R.
  Source: PUBLICATIONS OF THE ASTRONOMICAL SOCIETY OF JAPAN,73(4): AUG, 2021
  DOI: 10.1093/pasj/psab038
• SIRIUS project. II. A new tree-direct hybrid code for smoothed particle hydrodynamics/N-body simulations of star clusters
  Author(s): Fujii, Michiko S.; Saitoh, Takayuki R.; Wang, Long; Hirai, Yutaka
  Source: PUBLICATIONS OF THE ASTRONOMICAL SOCIETY OF JAPAN,73(4): AUG, 2021
  DOI: 10.1093/pasj/psab037
• Non-viral Induction of Transgene-free iPSCs from Somatic Fibroblasts of Multiple Mammalian Species
  Author(s): Yoshimatsu, Sho; Nakajima, Mayutaka; Iguchi, Aozora; Sanosaka, Tsukasa; Sato, Tsukika; Nakamura, Mari; et al.
  Source: STEM CELL REPORTS,16(4): APR 13, 2021
  DOI: 10.1016/j.stemcr.2021.03.002
• Adlercreutzia hattorii sp. nov., an equol non- producing bacterium isolated from human faeces
  Author(s): Sakamoto, Mitsuo; Ikeyama, Nao; Yuki, Masahiro; Murakami, Takumi; Mori, Hiroshi; Iino, Takao; et al.
  Source: INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY,71(12): , 2021
  DOI: 10.1099/ijsem.0.005121
• Actinomadura violacea sp. nov., a madurastatin A1-producing strain isolated from lichen in Thailand
  Author(s): Kanchanasin, Pawina; Phongsopitanun, Wongsakorn; Yuki, Masahiro; Kudo, Takuji; Ohkuma, Moriya; Nakashima, Takuji; et al.
  Source: INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY,71(12): , 2021
  DOI: 10.1099/ijsem.0.005126
• Lentilactobacillus kosonis sp. nov., isolated from koso, a Japanese sugar-vegetable fermented beverage
  Author(s): Chiou, Tai-Ying; Suda, Wataru; Oshima, Kenshiro; Hattori, Masahira; Matsuzaki, Chiaki; Yamamoto, Kenji; et al.
  Source: INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY,71(11): , 2021
  DOI: 10.1099/ijsem.0.005128
• Caldicellulosiruptor diazotrophicus sp. nov., a thermophilic, nitrogen- fixing fermentative bacterium isolated from a terrestrial hot spring in Japan
  Author(s): Chen, Yuxin; Nishihara, Arisa; Iino, Takao; Ohkuma, Moriya; Haruta, Shin
  Source: INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY,71(9): , 2021
  DOI: 10.1099/ijsem.0.005014