4月10日-4月16日

Published Research Papers of RIKEN Researchers
total number of papers: 56

• Ebola virus-like particles reprogram cellular metabolism
  Author(s): Tang, Huaqi; Abouleila, Yasmine; Saris, Anno; Shimizu, Yoshihiro; Ottenhoff, Tom H. M.; Mashaghi, Alireza
  Source: JOURNAL OF MOLECULAR MEDICINE-JMM: MAR 24, 2023
  DOI: 10.1007/s00109-023-02309-4
• Subcellular mRNA localization and local translation of Arhgap11a in radial glial progenitors regulates cortical development
  Author(s): Pilaz, Louis-Jan; Liu, Jing; Joshi, Kaumudi; Tsunekawa, Yuji; Musso, Camila M.; D'Arcy, Brooke R.; et al.
  Source: NEURON,111(6): MAR 15, 2023
  DOI: 10.1016/j.neuron.2023.02.023
• Fourier domain structural relationship analysis for unsupervised multimodal change detection
  Author(s): Chen, Hongruixuan; Yokoya, Naoto; Chini, Marco
  Source: ISPRS JOURNAL OF PHOTOGRAMMETRY AND REMOTE SENSING,198: APR, 2023
  DOI: 10.1016/j.isprsjprs.2023.03.004
• Sometimes pulses just have to be perfect-An example based on the measurement of amide proton transverse relaxation rates in proteins
  Author(s): Rangadurai, Atul Kaushik; Toyama, Yuki; Kay, Lewis E.
  Source: JOURNAL OF MAGNETIC RESONANCE,349: APR, 2023
  DOI: 10.1016/j.jmr.2023.107412
• The Novel Chiral 2(5H)-Furanone Sulfones Possessing Terpene Moiety: Synthesis and Biological Activity
  Author(s): Khabibrakhmanova, Alsu M.; Faizova, Roza G.; Lodochnikova, Olga A.; Zamalieva, Regina R.; Latypova, Liliya Z.; Trizna, Elena Y.; et al.
  Source: MOLECULES,28(6): MAR, 2023
  DOI: 10.3390/molecules28062543
• BMP-1-induced GBA1 nuclear accumulation provokes CCN2 mRNA expression via importin-beta-mediated nucleocytoplasmic pathway
  Author(s): Muromachi, Koichiro; Nakano, Rei; Fujita-Yoshigaki, Junko; Sugiya, Hiroshi; Tani-Ishii, Nobuyuki
  Source: JOURNAL OF CELL COMMUNICATION AND SIGNALING: MAR 27, 2023
  DOI: 10.1007/s12079-023-00740-3
• Evaluation of the potential removal of phosphate using rice husk ash-derived zeolite NaP1
  Author(s): Tran-Nguyen, Phuong Lan; Ly, Kim-Phung; Nguyen, Thanh-Ty; Santoso, Shella Permatasari; Tran, Nguyen-Phuong-Dung; Angkawijaya, Artik Elisa; et al.
  Source: JOURNAL OF CHEMICAL TECHNOLOGY AND BIOTECHNOLOGY: MAR 23, 2023
  DOI: 10.1002/jctb.7365
• Structural resolution of a small organic molecule by serial X-ray free-electron laser and electron crystallography
  Author(s): Takaba, Kiyofumi; Maki-Yonekura, Saori; Inoue, Ichiro; Tono, Kensuke; Hamaguchi, Tasuku; Kawakami, Keisuke; et al.
  Source: NATURE CHEMISTRY: MAR 20, 2023
  DOI: 10.1038/s41557-023-01162-9
• Robust quantum control with disorder-dressed evolution
  Author(s): Araki, Tenzan; Nori, Franco; Gneiting, Clemens
  Source: PHYSICAL REVIEW A,107(3): MAR 17, 2023
  DOI: 10.1103/PhysRevA.107.032609
• Targeting Ras-binding domain of ELMO1 by computational nanobody design
  Author(s): Tam, Chunlai; Kukimoto-Niino, Mutsuko; Miyata-Yabuki, Yukako; Tsuda, Kengo; Mishima-Tsumagari, Chiemi; Ihara, Kentaro; et al.
  Source: COMMUNICATIONS BIOLOGY,6(1): MAR 17, 2023
  DOI: 10.1038/s42003-023-04657-w
• Energy of the boundary of spacetime
  Author(s): Hamada, Yu; Matsumoto, Nobuyuki
  Source: PROGRESS OF THEORETICAL AND EXPERIMENTAL PHYSICS,2023(3): MAR 9, 2023
  DOI: 10.1093/ptep/ptad027
• Comparing the transcriptome of developing native and iPSC-derived mouse retinae by single cell RNA sequencing
  Author(s): Georges, Anouk; Lavergne, Arnaud; Mandai, Michiko; Lepiemme, Fanny; Karim, Latifa; Demeulenaere, Loic; et al.
  Source: SCIENTIFIC REPORTS,13(1): JAN 21, 2023
  DOI: 10.1038/s41598-023-28429-y
• MINIMAL MODEL PROGRAM FOR SEMI-STABLE THREEFOLDS IN MIXED CHARACTERISTIC
  Author(s): Takamatsu, Teppei; Yoshikawa, Shou
  Source: JOURNAL OF ALGEBRAIC GEOMETRY: MAR 24, 2023
  DOI: 10.1090/jag/813
• Chiral symmetry restoration at high matter density observed in pionic atoms
  Author(s): Nishi, Takahiro; Itahashi, Kenta; Ahn, DeukSoon; Berg, Georg P. A.; Dozono, Masanori; Etoh, Daijiro; et al.
  Source: NATURE PHYSICS: MAR 23, 2023
  DOI: 10.1038/s41567-023-02001-x
• Characterizing an Optically Induced Sub-micrometer Gigahertz Acoustic Wave in a Silicon Thin Plate
  Author(s): Nakamura, Asuka; Shimojima, Takahiro; Ishizaka, Kyoko
  Source: NANO LETTERS: MAR 21, 2023
  DOI: 10.1021/acs.nanolett.2c03938
• Gradient to sectioning CUBE workflow for the generation and imaging of organoids with localized differentiation
  Author(s): Koh, Isabel; Hagiwara, Masaya
  Source: COMMUNICATIONS BIOLOGY,6(1): MAR 21, 2023
  DOI: 10.1038/s42003-023-04694-5
• DExD/H-box helicases in HIV-1 replication and their inhibition
  Author(s): Heaton, Steven M.; Gorry, Paul R.; Borg, Natalie A.
  Source: TRENDS IN MICROBIOLOGY,31(4): APR, 2023
  DOI: 10.1016/j.tim.2022.11.001
• Strong Polarization of a J=1/2 to 1/2 Transition Arising from Unexpectedly Large Quantum Interference
  Author(s): Nakamura, Nobuyuki; Numadate, Naoki; Oishi, Simpei; Tong, Xiao-Min; Gao, Xiang; Kato, Daiji; et al.
  Source: PHYSICAL REVIEW LETTERS,130(11): MAR 17, 2023
  DOI: 10.1103/PhysRevLett.130.113001
• Tissue-specific expression of carbohydrate sulfotransferases drives keratan sulfate biosynthesis in the notochord and otic vesicles of Xenopus embryos
  Author(s): Yasuoka, Yuuri
  Source: FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY,11: MAR 14, 2023
  DOI: 10.3389/fcell.2023.957805
• Blautia coccoides JCM1395(T) Achieved Intratumoral Growth with Minimal Inflammation: Evidence for Live Bacterial Therapeutic Potential by an Optimized Sample Preparation and Colony PCR Method
  Author(s): Nomura, Shoko; Sukowati, Erike W.; Shigeno, Yuko; Takahashi, Maiko; Kato, Akari; Benno, Yoshimi; et al.
  Source: PHARMACEUTICS,15(3): MAR, 2023
  DOI: 10.3390/pharmaceutics15030989
• Lipidome Profiling of Phosphorus Deficiency-Tolerant Rice Cultivars Reveals Remodeling of Membrane Lipids as a Mechanism of Low P Tolerance
  Author(s): Honda, Soichiro; Yamazaki, Yumiko; Mukada, Takumi; Cheng, Weiguo; Chuba, Masaru; Okazaki, Yozo; et al.
  Source: PLANTS-BASEL,12(6): MAR, 2023
  DOI: 10.3390/plants12061365
• Analysis of the evolution of resistance to multiple antibiotics enables prediction of the Escherichia coli phenotype-based fitness landscape
  Author(s): Iwasawa, Junichiro; Maeda, Tomoya; Shibai, Atsushi; Kotani, Hazuki; Kawada, Masako; Furusawa, Chikara
  Source: PLOS BIOLOGY,20(12): DEC, 2022
  DOI: 10.1371/journal.pbio.3001920
• Transcriptomic signatures in trophectoderm and inner cell mass of human blastocysts classified according to developmental potential, maternal age and morphology
  Author(s): Kai, Yoshiteru; Mei, Hailiang; Kawano, Hiroomi; Nakajima, Naotsuna; Takai, Aya; Kumon, Mami; et al.
  Source: PLOS ONE,17(12): DEC 1, 2022
  DOI: 10.1371/journal.pone.0278663
• Realization and Current-Driven Dynamics of Fractional Hopfions and Their Ensembles in a Helimagnet FeGe
  Author(s): Yu, Xiuzhen; Liu, Yizhou; Iakoubovskii, Konstantin V.; Nakajima, Kiyomi; Kanazawa, Naoya; Nagaosa, Naoto; et al.
  Source: ADVANCED MATERIALS: APR 2, 2023
  DOI: 10.1002/adma.202210646
• B-CNN: a deep learning method for accelerometer-based fatigue cracks monitoring system
  Author(s): Zhu, Yanjie; Sekiya, Hidehiko; Okatani, Takayuki; Tai, Masayuki; Morichika, Shogo
  Source: JOURNAL OF CIVIL STRUCTURAL HEALTH MONITORING: MAR 31, 2023
  DOI: 10.1007/s13349-023-00690-9
• Allantopyrone A interferes with the degradation of hypoxia-inducible factor 1 alpha protein by reducing proteasome activity in human fibrosarcoma HT-1080 cells
  Author(s): Okuda, Chiharu; Ueda, Yuto; Muroi, Makoto; Sanada, Emiko; Osada, Hiroyuki; Shiono, Yoshihito; et al.
  Source: JOURNAL OF ANTIBIOTICS: MAR 30, 2023
  DOI: 10.1038/s41429-023-00610-5
• Mapping the conformational landscape of the stimulatory heterotrimeric G protein
  Author(s): Huang, Shuya Kate; Picard, Louis-Philippe; Rahmatullah, Rima S. M.; Pandey, Aditya; Van Eps, Ned; Sunahara, Roger K.; et al.
  Source: NATURE STRUCTURAL & MOLECULAR BIOLOGY: MAR 30, 2023
  DOI: 10.1038/s41594-023-00957-1
• MORE PANICLES 3, a natural allele of OsTB1/FC1, impacts rice yield in paddy fields at elevated CO2 levels
  Author(s): Takai, Toshiyuki; Taniguchi, Yojiro; Takahashi, Megumu; Nagasaki, Hideki; Yamamoto, Eiji; Hirose, Sakiko; et al.
  Source: PLANT JOURNAL: MAR 27, 2023
  DOI: 10.1111/tpj.16143
• Molecular diagnosis of 405 individuals with autism spectrum disorder
  Author(s): Miyake, Noriko; Tsurusaki, Yoshinori; Fukai, Ryoko; Kushima, Itaru; Okamoto, Nobuhiko; Ohashi, Kei; et al.
  Source: EUROPEAN JOURNAL OF HUMAN GENETICS: MAR 27, 2023
  DOI: 10.1038/s41431-023-01335-7
• Impaired self-monitoring ability on reaction times of psychomotor vigilance task of nurses after a night shift
  Author(s): Nishimura, Yuki; Ikeda, Hiroki; Matsumoto, Shun; Izawa, Shuhei; Kawakami, Sayaka; Tamaki, Masako; et al.
  Source: CHRONOBIOLOGY INTERNATIONAL: MAR 26, 2023
  DOI: 10.1080/07420528.2023.2193270
• Subtype-selective agonists of plant hormone co-receptor COI1-JAZs identified from the stereoisomers of coronatine
  Author(s): Hayashi, Kengo; Kato, Nobuki; Bashir, Khurram; Nomoto, Haruna; Nakayama, Misuzu; Chini, Andrea; et al.
  Source: COMMUNICATIONS BIOLOGY,6(1): MAR 25, 2023
  DOI: 10.1038/s42003-023-04709-1
• Impact of skeletal muscle volume on patients with BCLC stage-B hepatocellular carcinoma undergoing sorafenib therapy
  Author(s): Saeki, Issei; Yamasaki, Takahiro; Yamauchi, Yurika; Kawaoka, Tomokazu; Uchikawa, Shinsuke; Hiramatsu, Akira; et al.
  Source: CANCER MEDICINE: MAR 23, 2023
  DOI: 10.1002/cam4.5810
• Differences in olfactory dysfunction and its relationship with cognitive function in schizophrenia patients with and without auditory verbal hallucinations
  Author(s): Wang, Qianjin; Ren, Honghong; Li, Zongchang; Li, Jinguang; Dai, Lulin; Dong, Min; et al.
  Source: EUROPEAN ARCHIVES OF PSYCHIATRY AND CLINICAL NEUROSCIENCE: MAR 22, 2023
  DOI: 10.1007/s00406-023-01589-8
• Strain-induced massless Dirac fermion state of the molecular conductor alpha-(BEDT-TTF)(2)I-3
  Author(s): Kawasugi, Yoshitaka; Suzuki, Haruto; Yamamoto, Hiroshi M.; Kato, Reizo; Tajima, Naoya
  Source: APPLIED PHYSICS LETTERS,122(12): MAR 20, 2023
  DOI: 10.1063/5.0141023
• GPR55 contributes to neutrophil recruitment and mechanical pain induction after spinal cord compression in mice
  Author(s): Ono, Teruaki; Yamashita, Tomohiro; Kano, Ryota; Inoue, Mariko; Okada, Shota; Kano, Koki; et al.
  Source: BRAIN BEHAVIOR AND IMMUNITY,110: MAY, 2023
  DOI: 10.1016/j.bbi.2023.03.008
• Core species and interactions prominent in fish-associated microbiome dynamics
  Author(s): Yajima, Daii; Fujita, Hiroaki; Hayashi, Ibuki; Shima, Genta; Suzuki, Kenta; Toju, Hirokazu
  Source: MICROBIOME,11(1): MAR 20, 2023
  DOI: 10.1186/s40168-023-01498-x
• Genome-Wide Association Study of Age-Related Macular Degeneration Reveals 2 New Loci Implying Shared Genetic Components with Central Serous Chorioretinopathy
  Author(s): Akiyama, Masato; Miyake, Masahiro; Momozawa, Yukihide; Arakawa, Satoshi; Maruyama-Inoue, Maiko; Endo, Mikiko; et al.
  Source: OPHTHALMOLOGY,130(4): APR, 2023
  DOI: 10.1016/j.ophtha.2022.10.034
• Cross sections of the Rb-83(p, ?)Sr- 84 and Kr-84(p, ?) Rb-85 reactions at energies characteristic of the astrophysical ? process
  Author(s): Williams, M.; Davids, B.; Lotay, G.; Nishimura, N.; Rauscher, T.; Gillespie, S. A.; et al.
  Source: PHYSICAL REVIEW C,107(3): MAR 13, 2023
  DOI: 10.1103/PhysRevC.107.035803
• Finding r-II Sibling Stars in the Milky Way with the Greedy Optimistic Clustering Algorithm
  Author(s): Hattori, Kohei; Okuno, Akifumi; Roederer, Ian U. U.
  Source: ASTROPHYSICAL JOURNAL,946(1): MAR 1, 2023
  DOI: 10.3847/1538-4357/acb93b
• Visualization of Electrolyte Reaction Field Near the Negative Electrode of a Lead Acid Battery by Means of Amplitude/Frequency Modulation Atomic Force Microscopy
  Author(s): Suzuki, Yuki; Imamura, Yuki; Katsube, Daiki; Kogure, Akinori; Hirai, Nobumitsu; Kimura, Munehiro
  Source: MATERIALS,16(6): MAR, 2023
  DOI: 10.3390/ma16062146
• H2A Ubiquitination Alters H3-tail Dynamics on Linker-DNA to Enhance H3K27 Methylation
  Author(s): Ohtomo, Hideaki; Ito, Shinsuke; McKenzie, Nicholas J.; Uckelmann, Michael; Wakamori, Masatoshi; Ehara, Haruhiko; et al.
  Source: JOURNAL OF MOLECULAR BIOLOGY,435(4): FEB 28, 2023
  DOI: 10.1016/j.jmb.2022.167936
• A novel NONO variant that causes developmental delay and cardiac phenotypes
  Author(s): Itai, Toshiyuki; Sugie, Atsushi; Nitta, Yohei; Maki, Ryuto; Suzuki, Takashi; Shinkai, Yoichi; et al.
  Source: SCIENTIFIC REPORTS,13(1): JAN 18, 2023
  DOI: 10.1038/s41598-023-27770-6
• Wickerhamiella bidentis sp. nov., a novel yeast species isolated from flowers and insects in Japan
  Author(s): Seike, Taisuke; Takekata, Hiroki; Uchida, Yui; Sakata, Natsue; Furusawa, Chikara; Matsuda, Fumio
  Source: INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY,73(3): , 2023
  DOI: 10.1099/ijsem.0.005739
• The Residual Structure of Unfolded Proteins was Elucidated from the Standard Deviation of NMR Intensity Differences
  Author(s): Mizuno, Fuko; Aoki, Saeko; Matsugami, Akimasa; Hayashi, Fumiaki; Nishimura, Chiaki
  Source: PROTEIN AND PEPTIDE LETTERS,30(2): , 2023
  DOI: 10.2174/0929866530666230104140830
• Pexophagy suppresses ROS-induced damage in leaf cells under high-intensity light
  Author(s): Oikawa, Kazusato; Goto-Yamada, Shino; Hayashi, Yasuko; Takahashi, Daisuke; Kimori, Yoshitaka; Shibata, Michitaro; et al.
  Source: NATURE COMMUNICATIONS,13(1): DEC 5, 2022
  DOI: 10.1038/s41467-022-35138-z
• Shedding light on latent pathogenesis and pathophysiology of mental disorders: the potential of iPS cell technology
  Author(s): Arioka, Yuko; Okumura, Hiroki; Sakaguchi, Hideya; Ozaki, Norio
  Source: PSYCHIATRY AND CLINICAL NEUROSCIENCES: APR 4, 2023
  DOI: 10.1111/pcn.13545
• Crown ether salt-doped ladder-type conducting polymers for air-stable n-type thermoelectric materials
  Author(s): Yura, Ryoto; Kumagai, Shohei; Adachi, Kiyohiro; Hashizume, Daisuke; Okamoto, Toshihiro; Nonoguchi, Yoshiyuki
  Source: CHEMICAL COMMUNICATIONS: MAR 30, 2023
  DOI: 10.1039/d3cc00840a
• Unusual pKa Values Mediate the Self-Assembly of Spider Dragline Silk Proteins
  Author(s): Oktaviani, Nur Alia; Malay, Ali D.; Matsugami, Akimasa; Hayashi, Fumiaki; Numata, Keiji
  Source: BIOMACROMOLECULES: MAR 29, 2023
  DOI: 10.1021/acs.biomac.2c01344
• Limiting fragmentation in heavy-ion stopping?
  Author(s): Hoelck, Johannes; Hiyama, Emiko; Wolschin, Georg
  Source: PHYSICS LETTERS B,840: MAY 10, 2023
  DOI: 10.1016/j.physletb.2023.137866
• Deep brain stimulation in posterior subthalamic area for Holmes tremor: Case reports with review of the literature
  Author(s): Kamo, Hikaru; Oyama, Genko; Ito, Masanobu; Iwamuro, Hirokazu; Umemura, Atsushi; Hattori, Nobutaka
  Source: FRONTIERS IN NEUROLOGY,14: MAR 23, 2023
  DOI: 10.3389/fneur.2023.1139477
• Pure Dephasing of Light-Matter Systems in the Ultrastrong and Deep-Strong Coupling Regimes
  Author(s): Mercurio, Alberto; Abo, Shilan; Mauceri, Fabio; Russo, Enrico; Macri, Vincenzo; Miranowicz, Adam; et al.
  Source: PHYSICAL REVIEW LETTERS,130(12): MAR 21, 2023
  DOI: 10.1103/PhysRevLett.130.123601
• Phylogenetic and functional properties of hagfish neurohypophysial hormone receptors distinct from their jawed vertebrate counterparts
  Author(s): Yamaguchi, Yoko; Takagi, Wataru; Kaiya, Hiroyuki; Konno, Norifumi; Yoshida, Masa-aki; Kuraku, Shigehiro; et al.
  Source: GENERAL AND COMPARATIVE ENDOCRINOLOGY,336: MAY 15, 2023
  DOI: 10.1016/j.ygcen.2023.114257
• Polaron with quadratic electron-phonon interaction
  Author(s): Ragni, Stefano; Hahn, Thomas; Zhang, Zhongjin; Prokof'ev, Nikolay; Kuklov, Anatoly; Klimin, Serghei; et al.
  Source: PHYSICAL REVIEW B,107(12): MAR 15, 2023
  DOI: 10.1103/PhysRevB.107.L121109
• Investigation of neutron imaging applications using fine-grained nuclear emulsion
  Author(s): Muneem, Abdul; Yoshida, Junya; Ekawa, Hiroyuki; Hino, Masahiro; Hirota, Katsuya; Ichikawa, Go; et al.
  Source: JOURNAL OF APPLIED PHYSICS,133(5): FEB 7, 2023
  DOI: 10.1063/5.0131098
• Enhancing methane recovery by intermittent substrate feeding and microbial community response in anaerobic digestion of glycerol
  Author(s): Vikromvarasiri, Nunthaphan; Koyama, Mitsuhiko; Kurniawan, Winarto; Pisutpaisal, Nipon; Nakasaki, Kiyohiko
  Source: RENEWABLE ENERGY,204: MAR, 2023
  DOI: 10.1016/j.renene.2023.01.002
• Frequency-segmented power amplification using multi-band radio frequency amplifiers to produce a high-voltage pulse
  Author(s): Togawa, Kazuaki; Maesaka, Hirokazu; Kobana, Reichiro; Tanaka, Hitoshi
  Source: REVIEW OF SCIENTIFIC INSTRUMENTS,93(7): JUL 1, 2022
  DOI: 10.1063/5.0093915