9月30日-10月6日

Published Research Papers of RIKEN Researchers
total number of papers: 39

• Synthesis of phenanthridine derivatives by a water-compatible gold-catalyzed hydroamination
  Author(s): Lin, Yixuan; Hashimoto, Riichi; Chang, Tsung-Che; Tanaka, Katsunori
  Source: BIOORGANIC & MEDICINAL CHEMISTRY,113: NOV 1, 2024
  DOI: 10.1016/j.bmc.2024.117928
• Paracraurococcus lichenis sp. nov., isolated from lichen in Thailand
  Author(s): Kingkaew, Engkarat; Kato, Shingo; Iino, Takao; Itoh, Takashi; Ohkuma, Moriya; Phongsopitanun, Wongsakorn; et al.
  Source: ARCHIVES OF MICROBIOLOGY,206(10): OCT, 2024
  DOI: 10.1007/s00203-024-04129-7
• Minimized Dark Consumption of Calvin Cycle Intermediates Facilitates the Initiation of Photosynthesis in Synechocystis sp. PCC 6803
  Author(s): Tanaka, Kenya; Kondo, Akihiko; Hasunuma, Tomohisa
  Source: PLANT AND CELL PHYSIOLOGY: SEP 27, 2024
  DOI: 10.1093/pcp/pcae102
• Time-specific lipid and gene expression responses to chilling stress in panicoid grass
  Author(s): Angkawijaya, Artik Elisa
  Source: JOURNAL OF EXPERIMENTAL BOTANY,75(18): SEP 26, 2024
  DOI: 10.1093/jxb/erae336
• Modeling Conformational Transitions of Biomolecules from Atomic Force Microscopy Images using Normal Mode Analysis
  Author(s): Wu, Xuan; Miyashita, Osamu; Tama, Florence
  Source: JOURNAL OF PHYSICAL CHEMISTRY B: SEP 25, 2024
  DOI: 10.1021/acs.jpcb.4c04189
• Mettl1-dependent m⁷G tRNA modification is essential for maintaining spermatogenesis and fertility in Drosophila melanogaster
  Author(s): Kaneko, Shunya; Miyoshi, Keita; Tomuro, Kotaro; Terauchi, Makoto; Tanaka, Ryoya; Kondo, Shu; et al.
  Source: NATURE COMMUNICATIONS,15(1): SEP 24, 2024
  DOI: 10.1038/s41467-024-52389-0
• Chloroplasts with clefts and holes: a reassessment of the chloroplast shape using 3D FE-SEM cellular reconstruction of two species of Chlamydomonas
  Author(s): Sato, Naoki; Sato, Mayuko; Wakazaki, Mayumi; Moriyama, Takashi; Hirashima, Takashi; Toyooka, Kiminori
  Source: PROTOPLASMA: SEP 23, 2024
  DOI: 10.1007/s00709-024-01990-7
• Polarized and Unpolarized Neutron Scattering for Magnetic Materials at the Triple-axis Spectrometer PONTA in JRR-3
  Author(s): Nakajima, Taro; Saito, Hiraku; Kobayashi, Naoki; Kawasaki, Takuro; Nakamura, Tatsuya; Kawano-Furukawa, Hazuki; et al.
  Source: JOURNAL OF THE PHYSICAL SOCIETY OF JAPAN,93(9): SEP 15, 2024
  DOI: 10.7566/JPSJ.93.091002
• Revealing asymmetry on mid-plane of protoplanetary disc through modelling of axisymmetric emission: methodology
  Author(s): Aizawa, Masataka; Muto, Takayuki; Momose, Munetake
  Source: MONTHLY NOTICES OF THE ROYAL ASTRONOMICAL SOCIETY,532(2): JUL 5, 2024
  DOI: 10.1093/mnras/stae1549
• CG-Kit: Code Generation Toolkit for performant and maintainable variants of source code applied to Flash-X hydrodynamics simulations
  Author(s): Rudi, Johann; Lee, Youngjun; Chadha, Aidan H.; Wahib, Mohamed; Weide, Klaus; O'Neal, Jared P.; et al.
  Source: FUTURE GENERATION COMPUTER SYSTEMS-THE INTERNATIONAL JOURNAL OF ESCIENCE,163: FEB, 2025
  DOI: 10.1016/j.future.2024.107511
• Optimizing graph neural network architectures for schizophrenia spectrum disorder prediction using evolutionary algorithms
  Author(s): Wang, Shurun; Tang, Hao; Himeno, Ryutaro; Sole-Casals, Jordi; Caiafa, Cesar F.; Han, Shuning; et al.
  Source: COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE,257: DEC, 2024
  DOI: 10.1016/j.cmpb.2024.108419
• Elucidating Li⁺-Ion Interactions with Ethylene Carbonate: Insights from Vibrational Infrared Spectroscopy, Electron Affinity Analysis, and Charge Dynamics to Enhance Lithium-Ion Battery Performance
  Author(s): Khan, Junaid; Khan, Matiullah; Uddin, Waqar; Begum, Paghunda; Ahmad, Farhan; Khan, Banaras; et al.
  Source: ENERGY TECHNOLOGY: SEP 27, 2024
  DOI: 10.1002/ente.202401235
• Osmotic energy conversion in serpentinite-hosted deep-sea hydrothermal vents
  Author(s): Lee, Hye-Eun; Okumura, Tomoyo; Ooka, Hideshi; Adachi, Kiyohiro; Hikima, Takaaki; Hirata, Kunio; et al.
  Source: NATURE COMMUNICATIONS,15(1): SEP 25, 2024
  DOI: 10.1038/s41467-024-52332-3
• Spatiotemporal EP4-fibulin-1 expression is associated with vascular intimal hyperplasia
  Author(s): Okumura, Shigekuni; Oka, Sayuki; Sasaki, Takako; Cooley, Marion A.; Hidaka, Yuko; Inoue, Hana; et al.
  Source: CARDIOVASCULAR RESEARCH: SEP 25, 2024
  DOI: 10.1093/cvr/cvae211
• The role of dendritic cells in the instruction of helper T cells in the allergic march
  Author(s): Kubo, Masato; Harada, Yasuyo; Sasaki, Takanori
  Source: INTERNATIONAL IMMUNOLOGY: SEP 24, 2024
  DOI: 10.1093/intimm/dxae050
• Magnetic coupled electronic landscape in bilayer-distorted titanium-based kagome metals
  Author(s): Hu, Yong; Le, Congcong; Chen, Long; Deng, Hanbin; Zhou, Ying; Plumb, Nicholas C.; et al.
  Source: PHYSICAL REVIEW B,110(12): SEP 19, 2024
  DOI: 10.1103/PhysRevB.110.L121114I
• Surface density of states and tunneling spectroscopy of a spin-3/2 superconductor with Bogoliubov Fermi surfaces
  Author(s): Ohashi, Ryoi; Kobayashi, Shingo; Kanazawa, Shotaro; Tanaka, Yukio; Kawaguchi, Yuki
  Source: PHYSICAL REVIEW B,110(10): SEP 19, 2024
  DOI: 10.1103/PhysRevB.110.104515
• Decision-Making with Predictions of Others' Likely and Unlikely Choices in the Human Brain
  Author(s): Ma, Ning; Harasawa, Norihiro; Ueno, Kenichi; Cheng, Kang; Nakahara, Hiroyuki
  Source: JOURNAL OF NEUROSCIENCE,44(37): SEP 11, 2024
  DOI: 10.1523/JNEUROSCI.2236-23.2024
• Circadian Rhythms Correlated in DNA Methylation and Gene Expression Identified in Human Blood and Implicated in Psychiatric Disorders
  Author(s): Tang, Haiyan; Chen, Shanshan; Yi, Liu; Xu, Sheng; Yang, Huihui; Li, Zongchang; et al.
  Source: AMERICAN JOURNAL OF MEDICAL GENETICS PART B-NEUROPSYCHIATRIC GENETICS: SEP 25, 2024
  DOI: 10.1002/ajmg.b.33005
• Similarity and characterization of structural and functional neural connections within species under isoflurane anesthesia in the common marmoset
  Author(s): Yoshimaru, Daisuke; Tsurugizawa, Tomokazu; Hata, Junichi; Muta, Kanako; Marusaki, Takuto; Hayashi, Naoya; et al.
  Source: NEUROIMAGE,300: DEC 15, 2024
  DOI: 10.1016/j.neuroimage.2024.120854
• A family of slice-torus invariants from the divisibility of Lee classes
  Author(s): Sano, Taketo; Sato, Kouki
  Source: TOPOLOGY AND ITS APPLICATIONS,357: NOV 1, 2024
  DOI: 10.1016/j.topol.2024.109059
• Meta-analysis of gonadal transcriptome provides novel insights into sex change mechanism across protogynous fishes
  Author(s): Nozu, Ryo; Kadota, Mitsutaka; Nakamura, Masaru; Kuraku, Shigehiro; Bono, Hidemasa
  Source: GENES TO CELLS: SEP 29, 2024
  DOI: 10.1111/gtc.13166
• Generalizable and transportable resting-state neural signatures characterized by functional networks, neurotransmitters, and clinical symptoms in autism
  Author(s): Itahashi, Takashi; Yamashita, Ayumu; Takahara, Yuji; Yahata, Noriaki; Aoki, Yuta Y.; Fujino, Junya; et al.
  Source: MOLECULAR PSYCHIATRY: SEP 28, 2024
  DOI: 10.1038/s41380-024-02759-3
• Isomer production studied with simultaneous decay curve analysis for alpha-particle induced reactions on natural platinum up to 29 MeV
  Author(s): Otuka, Naohiko; Takacs, Sandor; Aikawa, Masayuki; Ebata, Shuichiro; Haba, Hiromitsu
  Source: EUROPEAN PHYSICAL JOURNAL A,60(9): SEP 27, 2024
  DOI: 10.1140/epja/s10050-024-01383-7
• Optimal light cone for macroscopic particle transport in longrange systems: A quantum speed limit approach
  Author(s): Van Vu, Tan; Kuwahara, Tomotaka; Saito, Keiji
  Source: QUANTUM,8: SEP 25, 2024
  
• Optical properties of ferroelectric nematic liquid crystals
  Author(s): Araoka, Fumito; Nishikawa, Hiroya
  Source: MOLECULAR CRYSTALS AND LIQUID CRYSTALS: SEP 20, 2024
  DOI: 10.1080/15421406.2024.2408095
• Insidious chromatin change with a propensity to exhaust intestinal stem cells during aging
  Author(s): Tomita-Naito, Saki; Sulekh, Shivakshi; Yoo, Sa Kan
  Source: ISCIENCE,27(9): SEP 20, 2024
  DOI: 10.1016/j.isci.2024.110793
• Neurotransmitter recognition by human vesicular monoamine transporter 2
  Author(s): Im, Dohyun; Jormakka, Mika; Juge, Narinobu; Kishikawa, Jun-ichi; Kato, Takayuki; Sugita, Yukihiko; et al.
  Source: NATURE COMMUNICATIONS,15(1): SEP 16, 2024
  DOI: 10.1038/s41467-024-51960-z
• Strong consistency guarantees for clustering high-dimensional bipartite graphs with the spectral method
  Author(s): Braun, Guillaume
  Source: ELECTRONIC JOURNAL OF STATISTICS,18(2): , 2024
  DOI: 10.1214/24-EJS2271
• First-Principles study on proton transfer in triazole molecules
  Author(s): Yakin, Khusnul; Yamaguchi, Naoya; Nakajima, Takahito; Mizuno, Motohiro; Ishii, Fumiyuki
  Source: CHEMICAL PHYSICS LETTERS,856: DEC, 2024
  DOI: 10.1016/j.cplett.2024.141582
• Learning explainable task-relevant state representation for model-free deep reinforcement learning
  Author(s): Zhao, Tingting; Li, Guixi; Zhao, Tuo; Chen, Yarui; Xie, Ning; Niu, Gang; et al.
  Source: NEURAL NETWORKS,180: DEC, 2024
  DOI: 10.1016/j.neunet.2024.106741
• Human F-ATP synthase as a drug target
  Author(s): Gerle, Christoph; Jiko, Chimari; Nakano, Atsuki; Yokoyama, Ken; Gopalasingam, Chai C.; Shigematsu, Hideki; et al.
  Source: PHARMACOLOGICAL RESEARCH,209: NOV, 2024
  DOI: 10.1016/j.phrs.2024.107423
• Machine learning-guided reconstruction of cytoskeleton network from live-cell AFM images
  Author(s): Ju, Hanqiu; Skibbe, Henrik; Fukui, Masaya; Yoshimura, Shige H.; Naoki, Honda
  Source: ISCIENCE,27(10): OCT 18, 2024
  DOI: 10.1016/j.isci.2024.110907
• Artificial Intelligence-Based Histopathological Subtyping of High-Grade Serous Ovarian Cancer
  Author(s): Ueda, Akihiko; Nakai, Hidekatsu; Miyagawa, Chiho; Otani, Tomoyuki; Yoshida, Manabu; Murakami, Ryusuke; et al.
  Source: AMERICAN JOURNAL OF PATHOLOGY,194(10): OCT, 2024
  DOI: 10.1016/j.ajpath.2024.06.010
• Time and dose selective glucose metabolism for glucose homeostasis and energy conversion in the liver
  Author(s): Pan, Yifei; Hatano, Atsushi; Ohno, Satoshi; Morita, Keigo; Kokaji, Toshiya; Bai, Yunfan; et al.
  Source: NPJ SYSTEMS BIOLOGY AND APPLICATIONS,10(1): SEP 30, 2024
  DOI: 10.1038/s41540-024-00437-2
• Production Cross-Sections of Residual Nuclides from ⁹³Zr + p at 27 MeV/nucleon
  Author(s): Hwang, Jongwon; Chillery, Thomas; Dozono, Masanori; Imai, Nobuaki; Michimasa, Shin'ichiro; Sumikama, Toshiyuki; et al.
  Source: PROGRESS OF THEORETICAL AND EXPERIMENTAL PHYSICS,2024(9): SEP 27, 2024
  DOI: 10.1093/ptep/ptae139
• Aurora B and Aurora C pools at two chromosomal regions collaboratively maintain chromosome alignment and prevent aneuploidy at the second meiotic division in mammalian oocytes
  Author(s): Kouznetsova, Anna; Valentiniene, Sonata; Liu, Jian-Guo; Kitajima, Tomoya S.; Brismar, Hjalmar; Hoog, Christer
  Source: FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY,12: SEP 17, 2024
  DOI: 10.3389/fcell.2024.1470981
• Imaging antiferromagnetic domains in LiCoPO₄ via the optical magnetoelectric effect
  Author(s): Toth, B.; Kocsis, V.; Tokunaga, Y.; Taguchi, Y.; Tokura, Y.; Bordacs, S.
  Source: PHYSICAL REVIEW B,110(10): SEP 12, 2024
  DOI: 10.1103/PhysRevB.110.L100405
• Evolution from ultrafast demagnetization to magnetization reversal at the Fe sites in Gd₂₃Fe₆₇Co₁₀ with laser fluence, observed by the element-selective magneto-optical Kerr effect using an X-ray free electron laser
  Author(s): El Moussaoui, Souliman; Sumi, Toshihide; Senoo, Tomoaki; Hirata, Yasuyuki; Yamamoto, Kohei; Yoshikawa, Hiroki; et al.
  Source: JAPANESE JOURNAL OF APPLIED PHYSICS,63(9): SEP 2, 2024
  DOI: 10.35848/1347-4065/ad746d