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3月24日-3月30日

RIKEN Publication

Published Research Papers of RIKEN Researchers
total number of papers: 61

  • Chemical application improves stress resilience in plants
    Author(s): Bashir, Khurram; Todaka, Daisuke; Sako, Kaori; Ueda, Minoru; Aziz, Farhan; Seki, Motoaki
    Source: PLANT MOLECULAR BIOLOGY,115(2): APR, 2025
    DOI: 10.1007/s11103-025-01566-w
  • Multi-omics analysis reveals tissue-specific biosynthesis and accumulation of diterpene alkaloids in Aconitum japonicum
    Author(s): Rai, Megha; Rai, Amit; Mori, Tetsuya; Nakabayashi, Ryo; Nakamura, Michimi; Kojoma, Marsheige; et al.
    Source: JOURNAL OF NATURAL MEDICINES: MAR 20, 2025
    DOI: 10.1007/s11418-025-01881-y
  • Active Inference and Intentional Behavior
    Author(s): Friston, Karl J.; Salvatori, Tommaso; Isomura, Takuya; Tschantz, Alexander; Kiefer, Alex; Verbelen, Tim; et al.
    Source: NEURAL COMPUTATION,37(4): MAR 18, 2025
    DOI: 10.1162/neco_a_01738
  • A data-driven generative strategy to avoid reward hacking in multi-objective molecular design
    Author(s): Yoshizawa, Tatsuya; Ishida, Shoichi; Sato, Tomohiro; Ohta, Masateru; Honma, Teruki; Terayama, Kei
    Source: NATURE COMMUNICATIONS,16(1): MAR 11, 2025
    DOI: 10.1038/s41467-025-57582-3
  • Measurement of activation cross section of alpha-particle induced nuclear reactions on dysprosium
    Author(s): Takacs, S.; Ditroi, F.; Szucs, Z.; Aikawa, M.; Haba, H.; Usuda, S.; et al.
    Source: NUCLEAR INSTRUMENTS & METHODS IN PHYSICS RESEARCH SECTION B-BEAM INTERACTIONS WITH MATERIALS AND ATOMS,563: JUN, 2025
    DOI: 10.1016/j.nimb.2025.165670
  • ZIP13 marks muscle satellite cells and contributes to their quiescent and active phase balance
    Author(s): Yoshigai, Emi; Hara, Takafumi; Hashimoto, Masaki; Tsuzuki, Hidenao; Abe, Takaya; Inoue, Kenichi; et al.
    Source: SCIENTIFIC REPORTS,15(1): MAR 17, 2025
    DOI: 10.1038/s41598-025-92501-y
  • Phase-controlled higher-order exceptional points and nonreciprocal transmission in an optomechanical system
    Author(s): Qian, Yi-Bing; Deng, Ya-Ya; Tang, Lei; Lai, Deng-Gao; Hou, Bang-Pin
    Source: PHYSICAL REVIEW A,111(3): MAR 13, 2025
    DOI: 10.1103/PhysRevA.111.033512
  • Fermi resonance in the radiative vibrational cooling dynamics of N2O+
    Author(s): Harayama, S.; Kuma, S.; Kimura, N.; Chartkunchand, K. C.; Baba, M.; Murakami, T.; et al.
    Source: PHYSICAL REVIEW A,111(3): MAR 5, 2025
    DOI: 10.1103/PhysRevA.111.032803
  • Dynamics of Neuronal and Astrocytic Energy Molecules in Epilepsy
    Author(s): Furukawa, Kota; Ikoma, Yoko; Niino, Yusuke; Hiraoka, Yuichi; Tanaka, Kohichi; Miyawaki, Atsushi; et al.
    Source: JOURNAL OF NEUROCHEMISTRY,169(3): MAR, 2025
    DOI: 10.1111/jnc.70044
  • Commissioning of a compact multibend achromat lattice NanoTerasu: A new 3 GeV synchrotron radiation facility
    Author(s): Obara, Shuhei; Ueshima, Kota; Asaka, Takao; Hosaka, Yuji; Kan, Koichi; Nishimori, Nobuyuki; et al.
    Source: PHYSICAL REVIEW ACCELERATORS AND BEAMS,28(2): FEB 14, 2025
    DOI: 10.1103/PhysRevAccelBeams.28.020701
  • Two-dimensional correlation propagation dynamics with a cluster discrete phase-space method
    Author(s): Nagao, Kazuma; Yunoki, Seiji
    Source: PHYSICAL REVIEW A,111(2): FEB 12, 2025
    DOI: 10.1103/PhysRevA.111.023315
  • First comparative exoplanetology within a transiting multi-planet system: Comparing the atmospheres of V1298 Tau b and c
    Author(s): Barat, Saugata; Desert, Jean-Michel; Goyal, Jayesh M.; Vazan, Allona; Kawashima, Yui; Fortney, Jonathan J.; et al.
    Source: ASTRONOMY & ASTROPHYSICS,692: DEC 13, 2024
    DOI: 10.1051/0004-6361/202451127
  • Generalizable and transportable resting-state neural signatures characterized by functional networks, neurotransmitters, and clinical symptoms in autism
    Author(s): Itahashi, Takashi; Yamashita, Ayumu; Takahara, Yuji; Yahata, Noriaki; Aoki, Yuta Y.; Fujino, Junya; et al.
    Source: MOLECULAR PSYCHIATRY,30(4): APR, 2025
    DOI: 10.1038/s41380-024-02759-3
  • Superconductivity controlled by twist angle in monolayer NbSe2 on graphene
    Author(s): Naritsuka, Masahiro; Machida, Tadashi; Asano, Shun; Yanase, Youichi; Hanaguri, Tetsuo
    Source: NATURE PHYSICS: MAR 20, 2025
    DOI: 10.1038/s41567-025-02828-6
  • Adaptive evolution of sesquiterpene deoxyphomenone in mycoparasitism by Hansfordia pulvinata associated with horizontal gene transfer from Aspergillus species
    Author(s): Maeda, Kazuya; Sumita, Takuya; Nishi, Oumi; Sushida, Hirotoshi; Higashi, Yumiko; Nakagawa, Hiroyuki; et al.
    Source: MBIO: MAR 20, 2025
    DOI: 10.1128/mbio.04007-24
  • ALMA Reveals Thermal and Nonthermal Desorption of Methanol Ice in the HD 100546 Protoplanetary Disk
    Author(s): Evans, Lucy; Booth, Alice S.; Walsh, Catherine; Ilee, John D.; Keyte, Luke; Law, Charles J.; et al.
    Source: ASTROPHYSICAL JOURNAL,982(1): MAR 20, 2025
    DOI: 10.3847/1538-4357/adb287
  • In silico nanoscope to study the interplay of genome organization and transcription regulation
    Author(s): Gopi, Soundhararajan; Brandani, Giovanni B.; Tan, Cheng; Jung, Jaewoon; Gu, Chenyang; Mizutani, Azuki; et al.
    Source: NUCLEIC ACIDS RESEARCH,53(6): MAR 20, 2025
    DOI: 10.1093/nar/gkaf189
  • Predicting coronavirus disease 2019 severity using explainable artificial intelligence techniques
    Author(s): Ozawa, Takuya; Chubachi, Shotaro; Namkoong, Ho; Nemoto, Shota; Ikegami, Ryo; Asakura, Takanori; et al.
    Source: SCIENTIFIC REPORTS,15(1): MAR 19, 2025
    DOI: 10.1038/s41598-025-85733-5
  • VQ-STE: Scene text erasing with mask refinement and vector-quantized texture dictionary
    Author(s): Tang, Zhengmi; Miyazaki, Tomo; Wang, Zhijie; Huang, Yongsong; Mailoa, Jonathan Pradana; Omachi, Shinichiro
    Source: KNOWLEDGE-BASED SYSTEMS,315: APR 22, 2025
    DOI: 10.1016/j.knosys.2025.113306
  • Evaluating Cation-Exchange Membrane Properties Affecting Polymer Electrolyte Membrane Water Electrolysis
    Author(s): Nara, Miyuki; Fujii, Katsushi; Matsui, Daichi; Ogura, Atsushi; Murakami, Takeharu; Ogawa, Takayo; et al.
    Source: ACS OMEGA,10(10): MAR 6, 2025
    DOI: 10.1021/acsomega.4c10548
  • Improvement of Targeting Efficiency by Promoter Replacement of Markers in Integration Vectors
    Author(s): Matsuyama, Akihisa; Hashimoto, Atsushi; Arioka, Manabu; Yoshida, Minoru
    Source: GENES TO CELLS,30(2): MAR, 2025
    DOI: 10.1111/gtc.70013
  • Mass enhancement and metal-nonmetal transition driven by d-f hybridization in perovskite La1-xPrxCuO3
    Author(s): Takahashi, H.; Ito, M.; Fujioka, J.; Ochi, M.; Sakai, S.; Arita, R.; et al.
    Source: PHYSICAL REVIEW B,111(8): FEB 28, 2025
    DOI: 10.1103/PhysRevB.111.085153
  • Genomics yields biological and phenotypic insights into bipolar disorder
    Author(s): O'Connell, Kevin S.; Koromina, Maria; van der Veen, Tracey; Boltz, Toni; David, Friederike S.; Yang, Jessica Mei Kay; et al.
    Source: NATURE: JAN 22, 2025
    DOI: 10.1038/s41586-024-08468-9
  • SleepSatelightFTC: A Lightweight and Interpretable Deep Learning Model for Single-Channel EEG-Based Sleep Stage Classification
    Author(s): Ito, Aozora; Tanaka, Toshihisa
    Source: IEEE ACCESS,13: , 2025
    DOI: 10.1109/ACCESS.2025.3549436
  • Improving Machine Learning-Based Bacterial Discrimination by Learning Single-Cell Raman Data From Multiple Growth Phases
    Author(s): Oda, Nodoka; Kanno, Nanako; Kato, Shingo; Ohkuma, Moriya; Shigeto, Shinsuke
    Source: JOURNAL OF RAMAN SPECTROSCOPY: MAR 22, 2025
    DOI: 10.1002/jrs.6804
  • Narrowed pore conformations of aquaglyceroporins AQP3 and GlpF
    Author(s): Kozai, Daisuke; Inoue, Masao; Suzuki, Shota; Kamegawa, Akiko; Nishikawa, Kouki; Suzuki, Hiroshi; et al.
    Source: NATURE COMMUNICATIONS,16(1): MAR 20, 2025
    DOI: 10.1038/s41467-025-57728-3
  • Speeding up adiabatic ion transport in macroscopic multi-Penning-trap stacks for high-precision experiments
    Author(s): von Boehn, Moritz; Schaper, Jan; Coenders, Julia A.; Brombacher, Johannes; Meiners, Teresa; Niemann, Malte; et al.
    Source: COMMUNICATIONS PHYSICS,8(1): MAR 19, 2025
    DOI: 10.1038/s42005-025-02031-2
  • Analysis of Functional cis-Regulatory Elements Reveals Novel Transcriptional Regulatory Mechanisms in Gonadal Development
    Author(s): Kirino, Shizuka; Nakagawa, Ryuichi; Gau, Maki; Takasawa, Kei; Murakawa, Yasuhiro; Kawaji, Hideya; et al.
    Source: SEXUAL DEVELOPMENT: JAN 20, 2025
    DOI: 10.1159/000543594
  • Deterministic Compression of Word Embeddings
    Author(s): Nakamura, Yuki; Suzuki, Jun; Ito, Takumi; Inui, Kentaro
    Source: IEEE ACCESS,13: , 2025
    DOI: 10.1109/ACCESS.2025.3546226
  • Systematic Study of the Composition of Type I X-Ray Burst Ashes: Neutron Star Structure versus Reaction Rate Uncertainties
    Author(s): Zhen, Guoqing; Liu, Helei; Dohi, Akira; Lu, Guoliang; Nishimura, Nobuya; Zhu, Chunhua; et al.
    Source: ASTROPHYSICAL JOURNAL,982(2): APR 1, 2025
    DOI: 10.3847/1538-4357/adb71c
  • Spiro-fused dibenzo[g,p]chrysene: annulative π-extension (APEX) synthesis and properties
    Author(s): Song, Kanghui; Zhang, Yuying; Wu, Shuai; Yang, Sha; Wei, Shengchen; Chen, Songhua; et al.
    Source: ORGANIC CHEMISTRY FRONTIERS,12(7): MAR 25, 2025
    DOI: 10.1039/d4qo02104e
  • Spontaneous Twist of Ferroelectric Smectic Blocks in Polar Fluids
    Author(s): Nishikawa, Hiroya; Okumura, Yasushi; Kwaria, Dennis; Nihonyanagi, Atsuko; Araoka, Fumito
    Source: ADVANCED MATERIALS: MAR 24, 2025
    DOI: 10.1002/adma.202501946
  • The illusion of orientation repulsion is weakened in a temporally more predictable visual target
    Author(s): Nakamura, Tomoya; Murakami, Ikuya
    Source: ATTENTION PERCEPTION & PSYCHOPHYSICS: MAR 24, 2025
    DOI: 10.3758/s13414-025-03040-7
  • Piezoelectric Transition in a Nonpyroelectric Gyroidal Metal-Organic Framework
    Author(s): Kitou, Shunsuke; Ishikawa, Hajime; Tokunaga, Yusuke; Ueno, Masato; Sawa, Hiroshi; Nakamura, Yuiga; et al.
    Source: JOURNAL OF THE AMERICAN CHEMICAL SOCIETY: MAR 24, 2025
    DOI: 10.1021/jacs.5c00886
  • Solvatochromism Observed in the X-ray Absorption Spectrum of Indole Dissolved in Water
    Author(s): Tsuru, Shota; Nagasaka, Masanari
    Source: JOURNAL OF PHYSICAL CHEMISTRY A: MAR 21, 2025
    DOI: 10.1021/acs.jpca.5c00456
  • Brain network alterations in mobile phone use problem severity: A multimodal neuroimaging analysis
    Author(s): Yao, Lichang; Hikida, Keigo; Lu, Yinping; Wang, Luyao; Dai, Qi; Aki, Morio; et al.
    Source: JOURNAL OF BEHAVIORAL ADDICTIONS: MAR 21, 2025
    DOI: 10.1556/2006.2025.00021
  • Circularly Polarized Light-Induced Microwave Conductivity Measurement: Rapid Screening Technique of Electronic Conductivity in Chiral Molecular Materials
    Author(s): Koo, Yun Hee; Tsutsui, Yusuke; Omoto, Mikito; Yomogida, Yohei; Yanagi, Kazuhiro; Kato, Yuichiro K.; et al.
    Source: JOURNAL OF PHYSICAL CHEMISTRY LETTERS: MAR 21, 2025
    DOI: 10.1021/acs.jpclett.5c00370
  • Genetic properties underlying transcriptional variability across different perturbations
    Author(s): Tsuru, Saburo; Furusawa, Chikara
    Source: NATURE COMMUNICATIONS,16(1): MAR 21, 2025
    DOI: 10.1038/s41467-025-57642-8
  • The ATPase asymmetry: Novel computational insight into coupling diverse FO motors with tripartite F1
    Author(s): Kubo, Shintaroh; Okada, Yasushi
    Source: BIOPHYSICAL JOURNAL,124(6): MAR 18, 2025
    DOI: 10.1016/j.bpj.2024.03.013
  • Multi-objective optimization shielding design for a transportable accelerator-driven neutron source
    Author(s): Ma, Baolong; Jiang, Quanxu; Li, Xiaobo; Yang, Shanghui; Liu, Chuang; Li, Haipeng; et al.
    Source: JOURNAL OF INSTRUMENTATION,20(3): MAR, 2025
    DOI: 10.1088/1748-0221/20/03/P03025
  • Cryo-EM Analysis of a Unique Subnucleosome Containing Centromere-Specific Histone Variant CENP-A
    Author(s): Kawasaki, Osamu; Takizawa, Yoshimasa; Kiyokawa, Iori; Kurumizaka, Hitoshi; Nozawa, Kayo
    Source: GENES TO CELLS,30(2): MAR, 2025
    DOI: 10.1111/gtc.70016
  • Changes in importin levels promote nuclear proteasomal degradation of cell cycle-related proteins during THP-1 monocyte-to-macrophage differentiation
    Author(s): Kimura, Makoto; Ogawa, Yutaka; Motohashi, Shoko; Imamoto, Naoko
    Source: FEBS LETTERS,599(6): MAR, 2025
    DOI: 10.1002/1873-3468.70020
  • Krylov space approach to singular value decomposition in non-Hermitian systems
    Author(s): Nandy, Pratik; Pathak, Tanay; Xian, Zhuo-Yu; Erdmenger, Johanna
    Source: PHYSICAL REVIEW B,111(6): FEB 28, 2025
    DOI: 10.1103/PhysRevB.111.064203
  • Incommensurate broken helix induced by nonstoichiometry in the axion insulator candidate EuIn2As2
    Author(s): Gen, Masaki; Fujishiro, Yukako; Okigami, Kazuki; Hayami, Satoru; Birch, Max T.; Adachi, Kiyohiro; et al.
    Source: PHYSICAL REVIEW B,111(8): FEB 18, 2025
    DOI: 10.1103/PhysRevB.111.L081109
  • Atomic-vibration-induced nonlinear electronic polarization for terahertz detection
    Author(s): Li, Zhi; Irshad, Hussain; Gu, Yu; Mutailipu, Miriding; Iitaka, Toshiaki; Su, Haibin; et al.
    Source: PHYSICAL REVIEW B,111(8): FEB 18, 2025
    DOI: 10.1103/PhysRevB.111.085201
  • Enantioselective [3+2] Annulation of Aldimines with Alkynes by Scandium-Catalyzed C-H Activation
    Author(s): Mishra, Aniket; Hu, Jiameng; Cong, Xuefeng; Zhuo, Qingde; Nishiura, Masayoshi; Luo, Gen; et al.
    Source: ANGEWANDTE CHEMIE-INTERNATIONAL EDITION,64(5): JAN 27, 2025
    DOI: 10.1002/anie.202419567
  • Large language models open new way of AI-assisted molecule design for chemists
    Author(s): Ishida, Shoichi; Sato, Tomohiro; Honma, Teruki; Terayama, Kei
    Source: JOURNAL OF CHEMINFORMATICS,17(1): MAR 24, 2025
    DOI: 10.1186/s13321-025-00984-8
  • Breakdown of collinear factorization in the exclusive photoproduction of a π0γ pair with large invariant mass
    Author(s): Nabeebaccus, Saad; Schoenleber, Jakob; Szymanowski, Lech; Wallon, Samuel
    Source: PHYSICAL REVIEW D,111(3): FEB 26, 2025
    DOI: 10.1103/PhysRevD.111.034040
  • Polaronic neutron in dilute α matter: A p-wave Bose polaron
    Author(s): Tajima, Hiroyuki; Moriya, Hajime; Naito, Tomoya; Horiuchi, Wataru; Nakano, Eiji; Iida, Kei
    Source: PHYSICAL REVIEW C,111(2): FEB 5, 2025
    DOI: 10.1103/PhysRevC.111.025802
  • Pathways for Nucleation and Growth in Confined Spaces and at Interfaces
    Author(s): Legg, Benjamin A.; Hu, Yandi; Koishi, Ayumi; Whittaker, Michael
    Source: ELEMENTS,21(10): FEB, 2025
    DOI: 10.2138/gselements.21.1.40
  • Exploring orbital angular momentum and spin-orbit correlations for gluons at the Electron-Ion Collider
    Author(s): Bhattacharya, Shohini; Boussarie, Renaud; Hatta, Yoshitaka
    Source: PHYSICAL REVIEW D,111(3): FEB 1, 2025
    DOI: 10.1103/PhysRevD.111.034019
  • Patagonian toothfish-inspired aluminum coordination hydrogel sensors for real-time rainfall monitoring
    Author(s): Guan, Xiaoyu; Zhu, Yanxia; Luo, Jianxun; Wang, Xuechuan; Gong, Hao; Abosheasha, Mohammed A.; et al.
    Source: INTERNATIONAL JOURNAL OF EXTREME MANUFACTURING,7(4): AUG 1, 2025
    DOI: 10.1088/2631-7990/adb818
  • Enhanced alpha-synuclein pathology and exacerbated motor dysfunction in alpha-synuclein transgenic mice with autophagy deficiency
    Author(s): Noda, Sachiko; Sato, Shigeto; Yamakado, Hodaka; Takahashi, Ryosuke; Hattori, Nobutaka
    Source: BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS,758: APR 12, 2025
    DOI: 10.1016/j.bbrc.2025.151514
  • Efficient Defect Healing of Single-Walled Carbon Nanotubes through C2H2-Assisted Multiple-Cycle Treatment with Air Exposure
    Author(s): Shen, Man; Inoue, Taiki; Wang, Mengyue; Liu, Yuanjia; Kobayashi, Yoshihiro
    Source: ACS APPLIED MATERIALS & INTERFACES: MAR 25, 2025
    DOI: 10.1021/acsami.5c00619
  • Are Gitonic Dications Really Stable and Visible? Revisiting o,o-Diprotonated Dications of the Nitro Group
    Author(s): Kitazawa, Yu; Hoshino, Mahiro; Hashizume, Daisuke; Muranaka, Atsuya; Kimura, Mutsumi; Uchiyama, Masanobu
    Source: JOURNAL OF ORGANIC CHEMISTRY: MAR 25, 2025
    DOI: 10.1021/acs.joc.4c02241
  • Q-fid: Quantum Circuit Fidelity Improvement with LSTM Networks
    Author(s): Mao, Yikai; Shresthamali, Shaswot; Kondo, Masaaki
    Source: ADVANCED QUANTUM TECHNOLOGIES: MAR 24, 2025
    DOI: 10.1002/qute.202500022
  • Quadrupedal spine control strategies: exploring correlations between system dynamic responses and human perspectives
    Author(s): Hafner, Nicholas; Liu, Chaoran; Ishi, Carlos; Ishiguro, Hiroshi
    Source: ADVANCED ROBOTICS: MAR 19, 2025
    DOI: 10.1080/01691864.2025.2478922
  • DUIncoder: Learning to Detect Driving Under the Influence Behaviors from Various Normal Driving Data
    Author(s): Zhou, Haoran; Carballo, Alexander; Yamaoka, Masaki; Yamataka, Minori; Fujii, Keisuke; Takeda, Kazuya
    Source: SENSORS,25(6): MAR 9, 2025
    DOI: 10.3390/s25061699
  • OTFS-Based Handover Triggering in UAV Networks
    Author(s): Mohamed, Ehab Mahmoud; Hussein, Hany S.; Alnakhli, Mohammad Ahmed; Hashima, Sherief
    Source: DRONES,9(3): MAR 3, 2025
    DOI: 10.3390/drones9030185
  • Floquet Engineering the Quantum Rabi Model in the Ultrastrong Coupling Regime
    Author(s): Akbari, Kamran; Nori, Franco; Hughes, Stephen
    Source: PHYSICAL REVIEW LETTERS,134(6): FEB 12, 2025
    DOI: 10.1103/PhysRevLett.134.063602
  • Graph Neural Networks and Applied Linear Algebra
    Author(s): Moore, Nicholas S.; Cyr, Eric C.; Ohm, Peter; Siefert, Christopher M.; Tuminaro, Raymond S.
    Source: SIAM REVIEW,67(1): , 2025
    DOI: 10.1137/23M1609786

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