5月12日-5月18日

Published Research Papers of RIKEN Researchers
total number of papers: 52

• 1. JOB: Japan Omics Browser provides integrative visualization of multi-omics data
  Author(s): Takahashi, Yugo; Wang, Qingbo S.; Hasegawa, Takanori; Namkoong, Ho; Inoue, Fumitaka; Fukunaga, Koichi; et al.
  Source: BMC GENOMICS,26(1): MAY 7, 2025
  DOI: 10.1186/s12864-025-11639-1
• 2. ZNRF1-dependent regulation of AKT activity modulates Nav subcellular localization and AIS position in neurons to regulate fear-related behavior
  Author(s): Ohno, Moeka; Wakatsuki, Shuji; Kuniishi, Hiroshi; Sekiguchi, Masayuki; Takeuchi, Eri; Takao, Keizo; et al.
  Source: JOURNAL OF BIOCHEMISTRY: MAY 7, 2025
  DOI: 10.1093/jb/mvaf024
• 3. Breaking the vicious cycle: Reciprocal influences between social isolation and functional disability and the buffering effect of digital inclusion
  Author(s): Cui, Mingyu; Liu, Yang; Yang, Mengjiao; Miura, Kumi Watanabe; Zhang, Jinrui; Anme, Tokie
  Source: ARCHIVES OF GERONTOLOGY AND GERIATRICS,135: AUG, 2025
  DOI: 10.1016/j.archger.2025.105871
• 4. Laboratory evolution of the bacterial genome structure through insertion sequence activation
  Author(s): Kanai, Yuki; Shibai, Atsushi; Yokoi, Naomi; Tsuru, Saburo; Furusawa, Chikara
  Source: NUCLEIC ACIDS RESEARCH,53(9): MAY 22, 2025
  DOI: 10.1093/nar/gkaf331
• 5. Evolution of the Convective Core Mass during the Main Sequence
  Author(s): Shikauchi, Minori; Hirai, Ryosuke; Mandel, Ilya
  Source: ASTROPHYSICAL JOURNAL,984(2): MAY 9, 2025
  DOI: 10.3847/1538-4357/adc5fa
• 6. Metal Synergistic Dual Activation Enables Efficient Transesterification by Multinuclear Titanium Catalyst: Recycling and Upcycling of Polyester Waste
  Author(s): Shi, Zuowen; Jiang, Hao; Xue, Can; Yang, Yang; Hou, Zhaomin; Wang, Haobing
  Source: ANGEWANDTE CHEMIE-INTERNATIONAL EDITION: MAY 8, 2025
  DOI: 10.1002/anie.202505024
• 7. Hot-Injection Synthesis of Monodisperse π-SnS Nanocrystals
  Author(s): Phutthaphongloet, Thanyarat; Septianto, Ricky Dwi; Miranti, Retno; Adachi, Kiyohiro; Kubota, Yuta; Hashizume, Daisuke; et al.
  Source: ACS APPLIED NANO MATERIALS: MAY 7, 2025
  DOI: 10.1021/acsanm.5c00710
• 8. The long-term survival of enteroendocrine cells depends on their subtype and is linked to peripheral sensory innervation
  Author(s): Sesotyosari, Salsabila Luthfi; Kinoshita, Masato; Sunardi, Mukhamad; Lihan, Mo; Orii, Akimasa; Abe, Takaya; et al.
  Source: DEVELOPMENT GROWTH & DIFFERENTIATION: MAY 7, 2025
  DOI: 10.1111/dgd.70009
• 9. Anisotropy-Dependent Decay of Room Temperature Metastable Skyrmions and a Nascent Double-q Spin Texture in Co₈Zn₉Mn₃
  Author(s): White, Jonathan S.; Ukleev, Victor; Yu, Le; Tokura, Yoshinori; Taguchi, Yasujiro; Karube, Kosuke
  Source: ADVANCED MATERIALS: MAY 7, 2025
  DOI: 10.1002/adma.202501146
• 10. Interferon and TLR genes, but not endogenous bornavirus-like elements, limit BoDV1 replication after intracerebral infection
  Author(s): Koide, Rie; Abe, Takaya; Harimoto, Taichi; Kamada, Anselmo Jiro; Saito, Yuka; Guerrini, Matteo; et al.
  Source: PLOS PATHOGENS,21(5): MAY, 2025
  DOI: 10.1371/journal.ppat.1013165
• 11. Metal-insulator transitions in pyrochlore oxides
  Author(s): Tokura, Yoshinori; Motome, Yukitoshi; Ueda, Kentaro
  Source: REPORTS ON PROGRESS IN PHYSICS,88(5): MAY 1, 2025
  DOI: 10.1088/1361-6633/add0c5
• 12. Gradient-Enhanced Kriging-Based Parallel Efficient Global Optimization Algorithm and Its Application in Aerodynamic Shape Optimization
  Author(s): Fu, Hang; Wang, Qingyu; Nakashima, Takuji; Kawasaki, Asahi; Lai, Chenguang; Shimizu, Keigo; et al.
  Source: IEEE ACCESS,13: , 2025
  DOI: 10.1109/ACCESS.2025.3560292
• 13. Patients with periodontitis exhibit persistent dysbiosis of the gut microbiota and distinct serum metabolome
  Author(s): Miyauchi, Eiji; Yamazaki, Kyoko; Tsuboi, Yuuri; Nakajima, Takako; Ono, Shigeru; Mizuno, Kentaro; et al.
  Source: JOURNAL OF ORAL MICROBIOLOGY,17(1): DEC 31, 2025
  DOI: 10.1080/20002297.2025.2499284
• 14. ONOKORO project: Comprehensive research of cluster formation in medium-heavy and heavy nuclei
  Author(s): Kubota, Yuki; Agbekponou, Kodjo; Ahn, Deuksoon; Baba, Hidetada; Higuchi, Koshi; Hijikata, Yuto; et al.
  Source: NUCLEAR PHYSICS A,1060: AUG, 2025
  DOI: 10.1016/j.nuclphysa.2025.123123
• 15. Highly-sensitive peptide array using peptides immobilized on microbeads: Application to cow's milk allergy analysis
  Author(s): Tashiro, Hideo; Tashiro, Tomoko; Yamaide, Fumiya; Nakano, Taiji; Inoue, Yuzaburo; Takase, Yuki; et al.
  Source: ANALYTICAL BIOCHEMISTRY,703: AUG, 2025
  DOI: 10.1016/j.ab.2025.115865
• 16. Exploring the nuclear momentum anisotropy based on intermediate-energy heavy-ion collisions
  Author(s): Fan, Xiao-Hua; Yang, Zu-Xing; Chen, Peng-Hui; Li, Zhi-Pan; Zuo, Wei; Kimura, Masaaki; et al.
  Source: PHYSICS LETTERS B,866: JUL, 2025
  DOI: 10.1016/j.physletb.2025.139503
• 17. Long-range gating regulation by leaflet and autoinhibitory domains in mouse type 1 IP3 receptors
  Author(s): Hamada, Kozo; Terauchi, Akiko; Nakamura, Kyoko; Li, Yiying; Zhang, Jinyi; Li, Jialong; et al.
  Source: BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS,766: JUN 20, 2025
  DOI: 10.1016/j.bbrc.2025.151875
• 18. High precision X-ray spectroscopy of kaonic neon
  Author(s): Sgaramella, F.; Sirghi, D.; Toho, K.; Clozza, F.; Abbene, L.; Amsler, C.; et al.
  Source: PHYSICS LETTERS B,865: JUN, 2025
  DOI: 10.1016/j.physletb.2025.139492
• 19. A Stress Memory Effect in Olivine at Upper Mantle Pressures and Temperatures
  Author(s): Ohuchi, T.; Higo, Yuji; Tsujino, Noriyoshi; Kakizawa, Sho; Seto, Yusuke; Kono, Yoshio; et al.
  Source: GEOPHYSICAL RESEARCH LETTERS,52(9): MAY 16, 2025
  DOI: 10.1029/2025GL114960
• 20. Electronic Structure of Kramers Nodal-Line Semimetal YAuGe and Anomalous Hall Effect Induced by Magnetic Rare-Earth Substitution
  Author(s): Kurumaji, Takashi; Facio, Jorge I.; Mitsuishi, Natsuki; Imajo, Shusaku; Gen, Masaki; Kimata, Motoi; et al.
  Source: ADVANCED SCIENCE: MAY 8, 2025
  DOI: 10.1002/advs.202501669
• 21. Physics-Informed Deep Learning for Estimating the Spatial Distribution of Frictional Parameters in Slow Slip Regions
  Author(s): Fukushima, Rikuto; Kano, Masayuki; Hirahara, Kazuro; Ohtani, Makiko; Im, Kyungjae; Avouac, Jean-Philippe
  Source: JOURNAL OF GEOPHYSICAL RESEARCH-SOLID EARTH,130(5): MAY, 2025
  DOI: 10.1029/2024JB030256
• 22. Transparent, metal-free PEDOT:PSS neural interfaces for simultaneous recording of low-noise electrophysiology and artifact-free two-photon imaging
  Author(s): Kim, Hyun Woo; Kim, Jiwon; Kim, Jong Youl; Kim, Kyubeen; Lee, Ju Young; Kim, Taemin; et al.
  Source: NATURE COMMUNICATIONS,16(1): APR 29, 2025
  DOI: 10.1038/s41467-025-59303-2
• 23. Linking energetic instability to compositional changes in biological communities
  Author(s): Kadoya, Taku; Suzuki, Kenta; Terui, Akira
  Source: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA,122(17): APR 29, 2025
  DOI: 10.1073/pnas.2422701122
• 24. Approaching ¹⁰⁰Sn: Structural evolution in ^98,100Cd via lifetime measurements
  Author(s): Zhang, G.; Polettini, M.; Mengoni, D.; Benzoni, G.; Huang, Z.; Gorska, M.; et al.
  Source: PHYSICS LETTERS B,863: APR, 2025
  DOI: 10.1016/j.physletb.2025.139378
• 25. Gut microbiota associated with equol production in school-age children
  Author(s): Wada, Keiko; Suda, Wataru; Ueno, Tomomi; Masuoka, Hiroaki; Yamakawa, Michiyo; Nakashima, Yuma; et al.
  Source: EUROPEAN JOURNAL OF NUTRITION,64(4): JUN, 2025
  DOI: 10.1007/s00394-025-03625-w
• 26. Sex differences in adenosine deaminase activity associate with disparities in SARS-CoV-2 innate immunity
  Author(s): Saminathan, Priyanka; Mathews, Ian T.; Alimadadi, Ahmad; Fung, Kai; Kakugawa, Kiyokazu; Joosten, Leo A. B.; et al.
  Source: ISCIENCE,28(5): MAY 16, 2025
  DOI: 10.1016/j.isci.2025.112418
• 27. Nonlinear Optical Response in Kagome Lattice with Inversion Symmetry Breaking
  Author(s): Liu, Xiangyang; Lai, Junwen; Zhan, Jie; Yu, Tianye; Liu, Peitao; Yunoki, Seiji; et al.
  Source: ACS NANO: MAY 12, 2025
  DOI: 10.1021/acsnano.4c17371
• 28. Nucleosynthesis Conditions in Outflows of White Dwarfs Collapsing to Neutron Stars
  Author(s): Batziou, Eirini; Glas, Robert; Janka, H. -Thomas; Ehring, Jakob; Abdikamalov, Ernazar; Just, Oliver
  Source: ASTROPHYSICAL JOURNAL,984(2): MAY 9, 2025
  DOI: 10.3847/1538-4357/adc300
• 29. Unveiling quantum steering by quantum-classical uncertainty complementarity
  Author(s): Lee, Kuan-Yi; Lin, Jhen-Dong; Lemr, Karel; Cernoch, Antonin; Miranowicz, Adam; Nori, Franco; et al.
  Source: NPJ QUANTUM INFORMATION,11(1): MAY 8, 2025
  DOI: 10.1038/s41534-025-01017-w
• 30. NEUROD1 efficiently converts peripheral blood cells into neurons with partial reprogramming by pluripotency factors
  Author(s): Saito, Yoichi; Ishikawa, Mitsuru; Ohkuma, Mahito; Moody, Jonathan; Mabuchi, Yo; Sanosaka, Tsukasa; et al.
  Source: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA,122(18): MAY 6, 2025
  DOI: 10.1073/pnas.2401387122
• 31. Bottom-up design of peptide shapes in water using oligomers of N-methyl-l/d-alanine
  Author(s): Morimoto, Jumpei; Yokomine, Marin; Shiratori, Yota; Ueda, Takumi; Nakamuro, Takayuki; Takaba, Kiyofumi; et al.
  Source: CHEMICAL SCIENCE: MAY 2, 2025
  DOI: 10.1039/d5sc01483b
• 32. The generation of CEP-stable few-cycle pulses based on noncollinear optical parametric amplification in LiB₃O₅ pumped by third harmonic of a Yb:KGW laser
  Author(s): Ibrahim, Ahmed Ramadan; Kurihara, Takayuki; Gu, Yimin; Itatani, Jiro
  Source: APPLIED PHYSICS EXPRESS,18(5): MAY 1, 2025
  DOI: 10.35848/1882-0786/adcdbd
• 33. Dehydrogenation of a single acetylene molecule on the Cu(111) surface
  Author(s): Tateda, Shoma; Lee, Minhui; Katsube, Daiki; Inagaki, Maki; Trenary, Michael; Kazuma, Emiko; et al.
  Source: CHEMICAL COMMUNICATIONS: MAY 12, 2025
  DOI: 10.1039/d5cc01904d
• 34. Interfacial Synthesis of an Electro-Functional 2D Bis(terpyridine)copper(II) Polymer Nanosheet
  Author(s): Takada, Kenji; Komeda, Joe; Maeda, Hiroaki; Fukui, Naoya; Masunaga, Hiroyasu; Sasaki, Sono; et al.
  Source: MOLECULES,30(9): MAY 4, 2025
  DOI: 10.3390/molecules30092044
• 35. Measurement of Cross Sections and Momentum Distributions of Proton-Rich Radioactive Isotopes Produced from a 345-MeV/Nucleon ⁷⁸Kr Beam
  Author(s): Suzuki, H.; Fukuda, N.; Takeda, H.; Shimizu, Y.; Sumikama, T.; Yoshimoto, M.; et al.
  Source: PROGRESS OF THEORETICAL AND EXPERIMENTAL PHYSICS,2025(5): MAY, 2025
  DOI: 10.1093/ptep/ptaf050
• 36. Internal ploidy and heritable chromosome fragmentation in Parachlorella kessleri
  Author(s): Ishii, Kotaro; Asano, Madoka; Kazama, Yusuke; Takeshita, Tsuyoshi; Bisova, Katerina; Zachleder, Vilem; et al.
  Source: ALGAL RESEARCH-BIOMASS BIOFUELS AND BIOPRODUCTS,89: JUL, 2025
  DOI: 10.1016/j.algal.2025.104047
• 37. Identification of substituted acetanilide compounds as small molecule CBX2 inhibitors via in silico screening
  Author(s): Takase, Shohei; Kumar, Ashutosh; Yokoyama, Sho; Maemoto, Yuki; Aoki, Komei; Arata, Mayumi; et al.
  Source: BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS,767: JUN 30, 2025
  DOI: 10.1016/j.bbrc.2025.151882
• 38. Evidence for charge exchange emission in supernova remnant N 132D from XRISM/Resolve observations
  Author(s): Gu, Liyi; Yamaguchi, Hiroya; Foster, Adam; Katsuda, Satoru; Uchida, Hiroyuki; Sawada, Makoto; et al.
  Source: PUBLICATIONS OF THE ASTRONOMICAL SOCIETY OF JAPAN: MAY 14, 2025
  DOI: 10.1093/pasj/psaf036
• 39. Evidence of non-solar elemental composition in the clocked X-ray burster SRGA J144459.2-604207
  Author(s): Dohi, Akira; Nishimura, Nobuya; Hirai, Ryosuke; Takeda, Tomoshi; Iwakiri, Wataru; Tamagawa, Toru; et al.
  Source: PUBLICATIONS OF THE ASTRONOMICAL SOCIETY OF JAPAN: MAY 14, 2025
  DOI: 10.1093/pasj/psae117
• 40. Proton transport from the antimatter factory of CERN
  Author(s): Leonhardt, M.; Schweitzer, D.; Abbass, F.; Anjum, K. K.; Arndt, B.; Erlewein, S.; et al.
  Source: NATURE: MAY 14, 2025
  DOI: 10.1038/s41586-025-08926-y
• 41. Low-Rank, High-Order Tensor Completion via t-Product-Induced Tucker (tTucker) Decomposition
  Author(s): Li, Yaodong; Tan, Jun; Yang, Peilin; Zhou, Guoxu; Zhao, Qibin
  Source: NEURAL COMPUTATION,37(6): MAY 14, 2025
  DOI: 10.1162/neco_a_01756
• 42. Prefrontal encoding of an internal model for emotional inference
  Author(s): Gu, Xiaowei; Johansen, Joshua P.
  Source: NATURE: MAY 14, 2025
  DOI: 10.1038/s41586-025-09001-2
• 43. Single-cell views of fate reprogramming in de novo organogenesis
  Author(s): Morinaka, Hatsune; Chen, Yu; Sugimoto, Keiko
  Source: JOURNAL OF PLANT RESEARCH: MAY 14, 2025
  DOI: 10.1007/s10265-025-01644-6
• 44. Enhancing Compton telescope imaging with maximum a posteriori estimation A modified Richardson-Lucy algorithm for the Compton Spectrometer and Imager
  Author(s): Yoneda, H.; Siegert, T.; Martinez-Castellanos, I.; Gallego, S.; Karwin, C.; Bates, H.; et al.
  Source: ASTRONOMY & ASTROPHYSICS,697: MAY 13, 2025
  DOI: 10.1051/0004-6361/202453528
• 45. Effect of heterozygous deletions on phenotypic changes and dosage compensation in Arabidopsis thaliana
  Author(s): Ikoma, Takuya; Nishijima, Ryo; Ikeda, Miho; Ishii, Kotaro; Nagalla, Asanga Deshappriya; Abe, Tomoko; et al.
  Source: SCIENTIFIC REPORTS,15(1): MAY 13, 2025
  DOI: 10.1038/s41598-025-98141-6
• 46. Dual fragmentation via collision-induced and oxygen attachment dissociations using water and its radicals for C=C position-resolved lipidomics
  Author(s): Takeda, Hiroaki; Okamoto, Mami; Takahashi, Hidenori; Buyantogtokh, Bujinlkham; Kishi, Noriyuki; Okano, Hideyuki; et al.
  Source: COMMUNICATIONS CHEMISTRY,8(1): MAY 13, 2025
  DOI: 10.1038/s42004-025-01525-y
• 47. The habenula-interpeduncular nucleus-median raphe pathway regulates the outcome of social dominance conflicts in mice
  Author(s): Matsumata, Miho; Hirao, Kenzo; Kobayashi, Takuma; Handa, Takehisa; Zhou, Yijun; Sugiyama, Taku; et al.
  Source: CURRENT BIOLOGY,35(9): MAY 5, 2025
  DOI: 10.1016/j.cub.2025.03.036
• 48. Deformation and core plus n decoupling in the spectrum of 17C
  Author(s): Suhara, Tadahiro; Taniguchi, Yasutaka; Horiuchi, Wataru; Watanabe, Shin; Furumoto, Takenori
  Source: PHYSICAL REVIEW C,111(5): MAY 1, 2025
  DOI: 10.1103/PhysRevC.111.054301
• 49. Transposon-host arms race: a saga of genome evolution
  Author(s): Iwasaki, Yuka W.; Shoji, Keisuke; Nakagwa, Shinichi; Miyoshi, Tomoichiro; Tomari, Yukihide
  Source: TRENDS IN GENETICS,41(5): MAY, 2025
  DOI: 10.1016/j.tig.2025.01.009
• 50. Two-dimensional superconductivity of epitaxial tantalum films
  Author(s): Chen, Xiaoxiang; Tang, Chenjia; Yao, Lifang; Cao, Zongzheng; Zhu, Yuying; Zhang, Ding; et al.
  Source: PHYSICAL REVIEW B,111(18): MAY 1, 2025
  DOI: 10.1103/PhysRevB.111.184503
• 51. Resonant stroboscopic Rydberg dressing: Electron-motion coupling and multibody interactions
  Author(s): Nill, Chris; de Leseleuc, Sylvain; Gross, Christian; Lesanovsky, Igor
  Source: PHYSICAL REVIEW A,111(4): APR 29, 2025
  DOI: 10.1103/PhysRevA.111.L041104
• 52. Tensor cross interpolation approach for quantum impurity problems based on the weak-coupling expansion
  Author(s): Matsuura, Shuta; Shinaoka, Hiroshi; Werner, Philipp; Tsuji, Naoto
  Source: PHYSICAL REVIEW B,111(15): APR 28, 2025
  DOI: 10.1103/PhysRevB.111.155150