5月19日-5月25日
RIKEN Publication
Published Research Papers of RIKEN Researchers
total number of papers: 55
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Salvianolic acid B ameliorates Aβ42 toxicity in Aβ42-expressing Drosophila model: behavioral and transcriptomic profiling
Author(s): Tan, Florence Hui Ping; Azzam, Ghows; Najimudin, Nazalan; Shamsuddin, Shaharum; Zainuddin, Azalina; Kasihmuddin, Mohd Shareduwan Mohd
Source: METABOLIC BRAIN DISEASE,40(5): MAY 16, 2025
DOI: 10.1007/s11011-025-01625-7 -
HDXRank: A Deep Learning Framework for Ranking Protein Complex Predictions with Hydrogen-Deuterium Exchange Data
Author(s): Wang, Liyao; Tucs, Andrejs; Ding, Songting; Tsuda, Koji; Sljoka, Adnan
Source: JOURNAL OF CHEMICAL THEORY AND COMPUTATION: MAY 14, 2025
DOI: 10.1021/acs.jctc.5c00175 -
Xenon-Gas Ionization Chamber to Improve the Z Identification of Heavy-Ion Beams with Z > 70
Author(s): Yoshimoto, Masahiro; Fukuda, Naoki; Matsumura, Riku; Nishimura, Daiki; Otsu, Hideaki; Shimizu, Yohei; et al.
Source: PROGRESS OF THEORETICAL AND EXPERIMENTAL PHYSICS,2025(5): MAY, 2025
DOI: 10.1093/ptep/ptaf063 -
Reconstructing monthly 20th century salinity fields using a data-driven method and Argo data
Author(s): Oulhen, Erwan; Kolodziejczyk, Nicolas; Tandeo, Pierre; Blanke, Bruno; Sevellec, Florian
Source: OCEAN DYNAMICS,75(6): JUN, 2025
DOI: 10.1007/s10236-025-01690-7 -
Federated SPARQL query performance evaluation for exploring disease model mouse: combining gene expression, orthology, and disease knowledge graphs
Author(s): Kushida, Tatsuya; de Farias, Tarcisio Mendes; Sima, Ana C.; Dessimoz, Christophe; Chiba, Hirokazu; Bastian, Frederic B.; et al.
Source: BMC MEDICAL INFORMATICS AND DECISION MAKING,25(SUPPL1): MAY 16, 2025
DOI: 10.1186/s12911-025-03013-8 -
3-Dicyanomethylene-Substituted Thienothiophenes as the Terminal Units in Non-Fullerene Electron Acceptor Molecules for Organic Photovoltaics
Author(s): Shibahashi, Kensuke; Nakamura, Masato; Kawabata, Kohsuke; Takimiya, Kazuo
Source: CHEMISTRY-AN ASIAN JOURNAL: MAY 16, 2025
DOI: 10.1002/asia.202500524 -
NinjaSat: Astronomical X-ray CubeSat observatory
Author(s): Tamagawa, Toru; Enoto, Teruaki; Kitaguchi, Takao; Iwakiri, Wataru; Kato, Yo; Numazawa, Masaki; et al.
Source: PUBLICATIONS OF THE ASTRONOMICAL SOCIETY OF JAPAN: MAY 14, 2025
DOI: 10.1093/pasj/psaf014 -
Nanometer-thick Si/Al gradient materials for spin torque generation
Author(s): Horaguchi, Taisuke; He, Cong; Wen, Zhenchao; Nakayama, Hayato; Ohkubo, Tadakatsu; Mitani, Seiji; et al.
Source: SCIENCE ADVANCES,11(19): MAY 9, 2025
DOI: 10.1126/sciadv.adr9481 -
Thermoelectric effect in a superconductor with Bogoliubov Fermi surfaces
Author(s): Sano, Tomoya; Sato, Takumi; Sasaki, Akihiro; Ikegaya, Satoshi; Kobayashi, Shingo; Asano, Yasuhiro
Source: PHYSICAL REVIEW B,111(17): MAY 1, 2025
DOI: 10.1103/PhysRevB.111.174503 -
Energy-Free Sensing and Context Recognition Using Photovoltaic Cells
Author(s): Shintani, Kaede; Rizk, Hamada; Yamaguchi, Hirozumi
Source: IEEE SENSORS JOURNAL,25(9): MAY 1, 2025
DOI: 10.1109/JSEN.2025.3549473 -
Systematic Ocular Phenotyping of Knockout Mouse Lines Identifies Genes Associated With Age-Related Corneal Dystrophies
Author(s): Briere, Andrew; Vo, Peter; Yang, Benjamin; Adams, David; Amano, Takanori; Amarie, Oana; et al.
Source: INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE,66(5): MAY, 2025
DOI: 10.1167/iovs.66.5.7 -
Fate of Σc, Ξc′ and Ωc baryons at high temperature with chiral-symmetry restoration
Author(s): Suenaga, Daiki; Oka, Makoto
Source: PHYSICAL REVIEW D,111(7): APR 28, 2025
DOI: 10.1103/PhysRevD.111.074032 -
Desulfovibrio falkowii sp. nov., Porphyromonas miyakawae sp. nov., Mediterraneibacter flintii sp. nov. and Owariibacterium komagatae gen. nov., sp. nov., isolated from human faeces
Author(s): Hamaguchi, Tomonari; Ohara, Misuzu; Hisatomi, Atsushi; Sekiguchi, Kyohei; Takeda, Jun-ichi; Ueyama, Jun; et al.
Source: INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY,75(1): , 2025
DOI: 10.1099/ijsem.0.006636 -
In-Plane Anomalous Hall Effect Associated with Orbital Magnetization: Measurements of Low-Carrier Density Films of a Magnetic Weyl Semimetal
Author(s): Nakamura, Ayano; Nishihaya, Shinichi; Ishizuka, Hiroaki; Kriener, Markus; Watanabe, Yuto; Uchida, Masaki
Source: PHYSICAL REVIEW LETTERS,133(23): DEC 3, 2024
DOI: 10.1103/PhysRevLett.133.236602 -
Quasi-One-Dimensional Spin Dynamics in a Molecular Spin Liquid System
Author(s): Oshima, Yugo; Ishii, Yasuyuki; Pratt, Francis L.; Watanabe, Isao; Seo, Hitoshi; Tsumuraya, Takao; et al.
Source: PHYSICAL REVIEW LETTERS,133(23): DEC 3, 2024
DOI: 10.1103/PhysRevLett.133.236702 -
Exploring protein N-glycosylation in ammonia-oxidizing Nitrososphaerota archaea through glycoproteomic analysis
Author(s): Nakagawa, Satoshi; Yagi, Hirokazu; Suyama, Tomoki; Shimamura, Shigeru; Yanaka, Saeko; Yagi-Utsumi, Maho; et al.
Source: MBIO: MAY 19, 2025
DOI: 10.1128/mbio.03859-24 -
Electro-Sensing Analysis for Parkinson's Disease Biomarker on Dual-Electrode Surface: Complemented by Molecular Docking
Author(s): Adam, Hussaini; Gopinath, Subash C. B.; Kumarevel, Thirumananseri; Ashokkumar, Thanganadar; Adam, Tijjani; Arshad, M. K. Md; et al.
Source: BIOTECHNOLOGY AND APPLIED BIOCHEMISTRY: MAY 19, 2025
DOI: 10.1002/bab.2775 -
Motility-dependent selective transport of active matter in trap arrays: separation methods based on trapping-detrapping and deterministic lateral displacement
Author(s): Misko, Vyacheslav R.; Nori, Franco; De Malsche, Wim
Source: NANOSCALE: MAY 19, 2025
DOI: 10.1039/d5nr00675a -
High-Fat Diet-Induced Excessive Accumulation of Cerebral Cholesterol Esters and Microglial Dysfunction Exacerbate Alzheimer's Disease Pathology in APPNL-G-F mice
Author(s): Yang, Shuhan; Miyazaki, Hirofumi; Wannakul, Tunyanat; Amo, Eiko; Saido, Takaomi; Saito, Takashi; et al.
Source: MOLECULAR NEUROBIOLOGY: MAY 17, 2025
DOI: 10.1007/s12035-025-05052-8 -
An α-Helically Folded α-Aminoisobutyric Acid (Aib) Oligomer That Assembles into a Metal-Peptide Superhelical Nanotube
Author(s): Yuan, Wei; Pirillo, Jenny; Hijikata, Yuh; Aida, Takuzo; Sato, Hiroshi
Source: JOURNAL OF THE AMERICAN CHEMICAL SOCIETY: MAY 15, 2025
DOI: 10.1021/jacs.5c03534 -
Exploring the self-assembly of silk proteins through liquid-liquid phase separation
Author(s): Lay, Michelle Gracia; Oktaviani, Nur Alia; Malay, Ali D.; Numata, Keiji
Source: POLYMER JOURNAL: APR 28, 2025
DOI: 10.1038/s41428-025-01040-w -
Engineering cofacial porphyrin dimers using lacunary polyoxotungstates
Author(s): Yamaguchi, Masahiro; Yonesato, Kentaro; Shioya, Kaito; Li, Chifeng; Murata, Kei; Ishii, Kazuyuki; et al.
Source: CHEMICAL SCIENCE: APR 22, 2025
DOI: 10.1039/d5sc00814j -
The Effect of Multi-Task Learning on the Prediction of Neoantigen-MHC Class II Binding
Author(s): Ikkyu, Kazuhiro; Nikaido, Itoshi
Source: IEEE TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS,22(2): MAR-APR, 2025
DOI: 10.1109/TCBBIO.2025.3526707 -
Generation of Ensemble Perturbations Using Low-Precision Floating-Point Numbers
Author(s): Yamaura, Tsuyoshi
Source: JOURNAL OF THE METEOROLOGICAL SOCIETY OF JAPAN,103(4): AUG, 2025
DOI: 10.2151/jmsj.2025-022 -
Rehydration of ready-to-use gel powder to construct self-healing and injectable hydrogel for protein delivery
Author(s): Xi, Yi Fang; Chen, Yong Mei; Aziz, Yasir; Bi, Meng Liang; Song, He Ming; Li, Jian Hui; et al.
Source: EUROPEAN POLYMER JOURNAL,233: JUN 13, 2025
DOI: 10.1016/j.eurpolymj.2025.113987 -
Custom-made medium approach for effective enrichment and isolation of chemolithotrophic iron-oxidizing bacteria
Author(s): Uchijima, Tomoki; Kato, Shingo; Tanimoto, Kazuya; Shiraishi, Fumito; Hamamura, Natsuko; Tokunaga, Kohei; et al.
Source: FEMS MICROBIOLOGY ECOLOGY,101(6): JUN, 2025
DOI: 10.1093/femsec/fiaf051 -
The contribution of gametic phase disequilibrium to the heritability of complex traits
Author(s): Zhang, Yuanxiang; Sakaue, Saori; Morris, Sam; Graff, Mariaelisa; Yamamoto, Kenichi; Chen, Zhengming; et al.
Source: NATURE GENETICS: MAY 19, 2025
DOI: 10.1038/s41588-025-02192-4 -
SEgene identifies links between super enhancers and gene expression across cell types
Author(s): Shinkai, Norio; Asada, Ken; Machino, Hidenori; Takasawa, Ken; Takahashi, Satoshi; Kouno, Nobuji; et al.
Source: NPJ SYSTEMS BIOLOGY AND APPLICATIONS,11(1): MAY 19, 2025
DOI: 10.1038/s41540-025-00533-x -
Transformation from Suspension to Anisotropic Microfiber in the System of the Cholesteric Liquid Crystalline Phase of Chitin-Nanowhisker with the Surface Modified by Chitosan
Author(s): Wiwatsamphan, Phanicha; Tashiro, Kohji; Sasaki, Sono; Kertsomboon, Thanit; Pilasen, Patakorn; Maneechot, Fanatchanon; et al.
Source: BIOMACROMOLECULES: MAY 19, 2025
DOI: 10.1021/acs.biomac.4c01705 -
Conjugated Donor-Acceptor Macrocycles: Synthesis and Oxidation of ortho-Phenylene Bridged Cyclic Tetra(benzo[c][1,2,5]thiadiazole)
Author(s): Ma, Zhihao; Gu, Shijun; Lu, Xiuqin; Tajima, Keisuke; Chen, Fengkun
Source: JOURNAL OF ORGANIC CHEMISTRY: MAY 19, 2025
DOI: 10.1021/acs.joc.5c00373 -
Capturing structural intermediates in an animal-like cryptochrome photoreceptor by time-resolved crystallography
Author(s): Maestre-Reyna, Manuel; Hosokawa, Yuhei; Wang, Po-Hsun; Saft, Martin; Caramello, Nicolas; Engilberge, Sylvain; et al.
Source: SCIENCE ADVANCES,11(20): MAY 16, 2025
DOI: 10.1126/sciadv.adu7247 -
Structure of a photosystem I supercomplex from Galdieria sulphuraria close to an ancestral red alga
Author(s): Kato, Koji; Kumazawa, Minoru; Nakajima, Yoshiki; Suzuki, Takehiro; Dohmae, Naoshi; Shen, Jian-Ren; et al.
Source: SCIENCE ADVANCES,11(20): MAY 16, 2025
DOI: 10.1126/sciadv.adv7488 -
Leveraging Peripheral Visual Stimuli for Enhanced SSVEP-Based BCIs in Fast Calibration Scenario
Author(s): He, Xinjie; Allison, Brendan Z.; Liang, Wei; Chen, Weijie; Wang, Xingyu; Cichocki, Andrzej; et al.
Source: IEEE SENSORS JOURNAL,25(10): MAY 15, 2025
DOI: 10.1109/JSEN.2025.3554985 -
NinjaSat monitoring of Type I X-ray bursts from the clocked burster SRGA J144459.2-604207
Author(s): Takeda, Tomoshi; Tamagawa, Toru; Enoto, Teruaki; Kitaguchi, Takao; Kato, Yo; Mihara, Tatehiro; et al.
Source: PUBLICATIONS OF THE ASTRONOMICAL SOCIETY OF JAPAN: MAY 14, 2025
DOI: 10.1093/pasj/psaf003 -
Separation of dispersed microparticle from whole blood using three-dimensional helical tubular microfluidics
Author(s): Zhang, Shenghong; Lu, Yunshu; Li, Satoshi; Sugiyama, Kazuyasu; Noda, Shigeho; Che, Xiajing; et al.
Source: PHYSICS OF FLUIDS,37(5): MAY, 2025
DOI: 10.1063/5.0266385 -
Near-to Mid-Infrared Spectroscopic Study of Ice Analysis Using the AKARI/IRC and Spitzer/IRS Spectra
Author(s): Kim, Jaeyeong; Lee, Jeong-Eun; Kim, Chul-Hwan; Jeong, Woong-Seob; Yang, Yao-Lun
Source: JOURNAL OF THE KOREAN ASTRONOMICAL SOCIETY,58(1): JAN, 2025
DOI: 10.5303/JKAS.2025.58.1.111 -
μSR study on the 4f-hole doping in the Kondo semiconductor Ce1-xLaxOs2Al10
Author(s): Adam, Noraina; Tajudin, Saidah Sakinah Mohd; Asih, Retno; Sari, Dita Puspita; Devashibai, Adroja; Takabatake, Toshiro; et al.
Source: PHYSICA B-CONDENSED MATTER,713: SEP 15, 2025
DOI: 10.1016/j.physb.2025.417379 -
Kernel Bayesian tensor ring decomposition for multiway data recovery
Author(s): Huang, Zhenhao; Zhou, Guoxu; Qiu, Yuning; Chen, Xinqi; Zhao, Qibin
Source: NEURAL NETWORKS,189: SEP, 2025
DOI: 10.1016/j.neunet.2025.107500 -
Detection of single X-ray photons at 60 keV using a scintillator-coupled CITIUS detector
Author(s): Nishino, Haruki; Pauwels, Kristof; Douissard, Paul-Antoine; Kocsis, Menyhert; Honjo, Yoshiaki; Ozaki, Kyosuke; et al.
Source: NUCLEAR INSTRUMENTS & METHODS IN PHYSICS RESEARCH SECTION A-ACCELERATORS SPECTROMETERS DETECTORS AND ASSOCIATED EQUIPMENT,1078: SEP, 2025
DOI: 10.1016/j.nima.2025.170595 -
Measurement of α-particle-induced nuclear reaction cross sections on 45Sc
Author(s): Sakamoto, Emi; Aikawa, Masayuki; Nikaido, Shota; Goto, Saki; Nambu, Akihiro; Haba, Hiromitsu
Source: NUCLEAR INSTRUMENTS & METHODS IN PHYSICS RESEARCH SECTION B-BEAM INTERACTIONS WITH MATERIALS AND ATOMS,565: AUG, 2025
DOI: 10.1016/j.nimb.2025.165735 -
NICAM-LETKF JAXA Research Analysis (NEXRA) Version 2.0
Author(s): Matsugishi, Shuhei; Chen, Ying-Wen; Terasaki, Koji; Kanemaru, Kaya; Kotsuki, Shunji; Yashiro, Hisashi; et al.
Source: GEOSCIENCE DATA JOURNAL,12(3): JUL, 2025
DOI: 10.1002/gdj3.70011 -
Influence of pitch modulation on event-related potentials elicited by Dutch word stimuli in a brain-computer interface language rehabilitation task
Author(s): Kojima, Simon; Eren Kortenbach, Benjamin; Aalberts, Crispijn; Milosevska, Sara; de Wit, Kim; Zheng, Rosie; et al.
Source: JOURNAL OF NEURAL ENGINEERING,22(3): JUN 1, 2025
DOI: 10.1088/1741-2552/adc83d -
Flexible Thin-Film Heater Composed of Laser-Induced Graphene and Poly(D, L-Lactic Acid) with Electro- and Photo-Thermal Properties toward Cancer Thermotherapy
Author(s): Saito, Masato; Harada, Sota; Imai, Ran; Son, Kon; Fujie, Toshinori
Source: ADVANCED ELECTRONIC MATERIALS: MAY 22, 2025
DOI: 10.1002/aelm.202500062 -
A machine learning approach to reveal microstructures contributing to dislocation clusters in multicrystalline silicon
Author(s): Torii, Kazuma; Hara, Kyoka; Hatanaka, Daiki; Kojima, Takuto; Kutsukake, Kentaro; Kudo, Hiroaki; et al.
Source: JOURNAL OF APPLIED PHYSICS,137(19): MAY 21, 2025
DOI: 10.1063/5.0260424 -
Proteasome dysfunction in T cells causes immunodeficiency via cell cycle disruption and apoptosis
Author(s): Shinebaatar, Erkhembayar; Morimoto, Junko; Koga, Rinna; Nguyen, Thanh Nam; Sasaki, Yuki; Yonemura, Shigenobu; et al.
Source: INTERNATIONAL IMMUNOLOGY: MAY 21, 2025
DOI: 10.1093/intimm/dxaf021 -
Discovery of acylsulfenic acid-featuring natural product sulfenicin and characterization of its biosynthesis
Author(s): Xue, Dan; Zou, Hongbin; Qiu, Yanping; Lv, Wei; Madden, Michael D.; Xu, Mingming; et al.
Source: NATURE CHEMISTRY: MAY 20, 2025
DOI: 10.1038/s41557-025-01833-9 -
Atrial amyloidosis identified by biopsy in atrial fibrillation: prevalence and clinical presentation
Author(s): Shinzato, Kodai; Takahashi, Yuya; Yamaguchi, Takanori; Otsubo, Toyokazu; Nakashima, Kana; Yoshioka, Goro; et al.
Source: EUROPEAN HEART JOURNAL: MAY 20, 2025
DOI: 10.1093/eurheartj/ehaf332 -
Heisenberg and Heisenberg-like representations via Hilbert-space-bundle geometry in the non-Hermitian regime
Author(s): Ju, Chia-Yi; Miranowicz, Adam; Barnett, Jacob; Chen, Guang-Yin; Nori, Franco
Source: PHYSICAL REVIEW A,111(5): MAY 15, 2025
DOI: 10.1103/PhysRevA.111.052213 -
Whole-genome based phylogeny and comparative genomics of Sporidiobolales and related taxa of Basidiomycetes
Author(s): Kobayashi, Yuuki; Tanaka, Naoto; Matsutani, Minenosuke; Kurokawa, Yuuna; Aoki, Keita; Ohkuma, Moriya; et al.
Source: IMA FUNGUS,16: MAY 13, 2025
DOI: 10.3897/imafungus.16.141626 -
Combination of probiotics enhancing butyrogenesis in colonic microbiota model of patients with ulcerative colitis
Author(s): Inokuma, Kentaro; Sasaki, Daisuke; Shintani, Tomoya; Inoue, Jun; Oyama, Katsuaki; Noda, Yuta; et al.
Source: APPLIED MICROBIOLOGY AND BIOTECHNOLOGY,109(1): MAY 10, 2025
DOI: 10.1007/s00253-025-13424-2 -
Fingerprints of Mott and Slater gaps in the core-level photoemission spectra of antiferromagnetic iridates
Author(s): Nakagawa, K.; Hariki, A.; Okauchi, T.; Fujiwara, H.; Ahn, K. -H.; Murakami, Y.; et al.
Source: PHYSICAL REVIEW B,111(19): MAY 7, 2025
DOI: 10.1103/PhysRevB.111.195114 -
CsSnI3 Quantum Dots as a Multifunctional Interlayer for High-Efficiency Bilayer Perovskite Solar Cells
Author(s): Liu, Chunchen; Zhen, Xiaojian; Peng, Wenyuan; Huang, Kaixin; Zhang, Luozheng; Li, Ziyi; et al.
Source: ADVANCED ENERGY MATERIALS,15(19): MAY, 2025
DOI: 10.1002/aenm.202405074 -
Light-driven interlayer propagation of collective mode excitations in layered superconductors
Author(s): Ziereis, Niklas; Takasan, Kazuaki; Tsuji, Naoto
Source: PHYSICAL REVIEW B,111(13): APR 28, 2025
DOI: 10.1103/PhysRevB.111.134520 -
Light and Strange Vector Resonances from Lattice QCD at Physical Quark Masses
Author(s): Boyle, Peter; Erben, Felix; Gulpers, Vera; Hansen, Maxwell T.; Joswig, Fabian; Marshall, Michael; et al.
Source: PHYSICAL REVIEW LETTERS,134(11): MAR 18, 2025
DOI: 10.1103/PhysRevLett.134.111901 -
Autonomous adaptive optimization of NMR experimental conditions for precise inference of minor conformational states of proteins based on chemical exchange saturation transfer
Author(s): Kasai, Takuma; Kigawa, Takanori
Source: PLOS ONE,20(5): , 2025
DOI: 10.1371/journal.pone.0321692