9月1日-9月7日

Published Research Papers of RIKEN Researchers
total number of papers: 52

• Photonic band gaps in quasiperiodic approximants with a consideration of hyperuniformity
  Author(s): Takemori, Nayuta; Yamamoto, Akiji
  Source: JOURNAL OF PHYSICS-CONDENSED MATTER,37(35): SEP 1, 2025
  DOI: 10.1088/1361-648X/adfbb9
• Non-equilibrating a black hole with inhomogeneous quantum quench
  Author(s): Goto, Kanato; Nozaki, Masahiro; Ryu, Shinsei; Tamaoka, Kotaro; Tan, Mao Tian
  Source: JOURNAL OF HIGH ENERGY PHYSICS(8): AUG 25, 2025
  DOI: 10.1007/JHEP08(2025)186
• Manipulating dietary protein and amino acids in the common marmoset Callithrix jacchus impacts circulating metabolites and FGF21 levels
  Author(s): Fujita, Yuka; Ishibuchi, Tomoko; Uematsu, Akiko; Hayashi, Takuya; Obata, Fumiaki
  Source: SCIENTIFIC REPORTS,15(1): AUG 23, 2025
  DOI: 10.1038/s41598-025-16749-0
• Efficacy and Safety of 5-Aminolevulinic Acid Hydrochloride Combined with Sodium Ferrous Citrate in Pediatric Patients with Leigh Syndrome and Central Nervous System Disorders: An Initial Exploratory Trial with a Double-Blind Placebo-Controlled Period, Followed by an Open-Label Period and a Subsequent Long-Term Administration Study
  Author(s): Abe, Yuichi; Hamasaki, Toshimitsu; Natsume, Jun; Mogami, Yukiko; Murayama, Kei; Shiraishi, Hideaki; et al.
  Source: LIFE-BASEL,15(8): JUL 23, 2025
  DOI: 10.3390/life15081168
• Structural Analysis and Molecular Dynamics Simulations of Urease From Ureaplasma parvum
  Author(s): Wu, Heng Ning; Fujita, Junso; Nakura, Yukiko; Inoue, Masao; Suzuki, Koichiro; Ekimoto, Toru; et al.
  Source: JOURNAL OF MOLECULAR BIOLOGY,437(21): NOV 1, 2025
  DOI: 10.1016/j.jmb.2025.169368
• Mitochondrial hyper-acetylation induced by an engineered acetyltransferase promotes cellular senescence
  Author(s): Shimazu, Tadahiro; Kataoka, Ayane; Suzuki, Takehiro; Dohmae, Naoshi; Shinkai, Yoichi
  Source: ISCIENCE,28(9): SEP 19, 2025
  DOI: 10.1016/j.isci.2025.113233
• Allogeneic germline stem cell transplantation restores fertility in nonablated recipient mice†
  Author(s): Morimoto, Hiroko; Ogonuki, Narumi; Matoba, Shogo; Tokita, Syun; Kanatsu-Shinohara, Mito; Miyazaki, Takehiro; et al.
  Source: BIOLOGY OF REPRODUCTION: AUG 27, 2025
  DOI: 10.1093/biolre/ioaf183
• Impact of Surgical Margin Control in Index Tumors on Prognosis After Radical Prostatectomy: A Focus on Zonal Origin
  Author(s): Akatsuka, Jun; Ogata, Yoshihiko; Obayashi, Kotaro; Takadate, Mami; Ikuma, Shunsuke; Hasegawa, Hiroya; et al.
  Source: CURRENT ONCOLOGY,32(8): AUG 7, 2025
  DOI: 10.3390/curroncol32080445
• Changes in ORF4 of HCoV-229E under different culture conditions
  Author(s): Kitai, Yuki; Kojima, Shohei; Aishajiang, Aikeda; Kawase, Miyuki; Watanabe, Oshi; Yabukami, Haruka; et al.
  Source: JOURNAL OF GENERAL VIROLOGY,106(7): , 2025
  DOI: 10.1099/jgv.0.002131
• Hidden Markov models reveal behavioral state dynamics in depth-related locomotion in mice
  Author(s): Shuto, Hironobu; Maeda, Toshiki; Koike, Chieko; Takahashi, Masayo; Mandai, Michiko; Matsuyama, Take
  Source: PLOS ONE,20(8): AUG 26, 2025
  DOI: 10.1371/journal.pone.0329367
• Production of neutron-rich heavy nuclei in deep-inelastic ²⁰⁸Pb+²⁰⁸Pb collisions within the stochastic mean-field theory
  Author(s): Sekizawa, K.; Ayik, S.; Karanfil, E. C.; Arik, M.; Yilmaz, O.; Umar, A. S.
  Source: PHYSICAL REVIEW C,112(2): AUG 20, 2025
  DOI: 10.1103/g7yp-d6yq
• A dream EEG and mentation database
  Author(s): Wong, William; Herzog, Ruben; Andrade, Katia Cristine; Andrillon, Thomas; de Araujo, Draulio Barros; Arnulf, Isabelle; et al.
  Source: NATURE COMMUNICATIONS,16(1): AUG 13, 2025
  DOI: 10.1038/s41467-025-61945-1
• Potential Involvement of Myostatin in Smooth Muscle Differentiation in Pleomorphic Leiomyosarcoma
  Author(s): Onagi, Hiroko; Son, Raku; Oguchi, Akiko; Sano, Kei; Sasa, Keita; Hasegawa, Nobuhiko; et al.
  Source: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES,26(16): AUG 8, 2025
  DOI: 10.3390/ijms26167676
• Insights from public database sequences related to the replication initiation protein TrfA of the IncP-1 plasmid RK2
  Author(s): Suzuki, Haruo; Moriguchi, Kazuki; Shintani, Masaki; Suzuki, Masato; Nojiri, Hideaki
  Source: PLASMID,134: SEP-NOV, 2025
  DOI: 10.1016/j.plasmid.2025.102756
• A Novel PROTAC G9a/GLP Degrader that Inhibits, Similar to G9a siRNA, the Migration of MCF-7 Breast-Cancer Cells without Affecting Proliferation
  Author(s): Mukherjee, Anirban; Yamashita, Yasunobu; Maeda, Ryo; Akiyama, Toshiki; Endo, Katsunori; Takada, Yuri; et al.
  Source: JOURNAL OF MEDICINAL CHEMISTRY: AUG 31, 2025
  DOI: 10.1021/acs.jmedchem.5c00704
• Regulation of divergent epithelial-to-mesenchymal transition responses via the CDK4/6-USP51 pathway through ZEB1 protein stabilization
  Author(s): Sakamoto, Yuta; Takahashi, Masataka; Nishimura, Hajime; Watanabe, Kazuhide; Suzuki, Harukazu
  Source: SCIENTIFIC REPORTS,15(1): AUG 29, 2025
  DOI: 10.1038/s41598-025-17310-9
• Simultaneous in vitro expression of minimal 21 transfer RNAs by tRNA array method
  Author(s): Miyachi, Ryota; Masuda, Keiko; Shimizu, Yoshihiro; Ichihashi, Norikazu
  Source: NATURE COMMUNICATIONS,16(1): AUG 26, 2025
  DOI: 10.1038/s41467-025-62588-y
• Optogenetic actin network assembly on lipid bilayer uncovers the network density-dependent functions of actin-binding proteins
  Author(s): Yamamoto, Kei; Miyazaki, Makito
  Source: NATURE COMMUNICATIONS,16(1): AUG 26, 2025
  DOI: 10.1038/s41467-025-62653-6
• SeeThrough: a rationally designed skull clearing technique for in vivo brain imaging
  Author(s): Liu, Xinyi; Uchigashima, Motokazu; Oomoto, Ikumi; Saito, Yoshihito; Uchida, Hitoshi; Oginezawa, Shinya; et al.
  Source: NATURE COMMUNICATIONS,16(1): AUG 26, 2025
  DOI: 10.1038/s41467-025-62836-1
• Multi-horizon prediction of tropical cyclone intensity and its interpretability with temporal fusion transformer
  Author(s): Mulia, Iyan E.; Shimada, Udai; Ueda, Naonori; Miyoshi, Takemasa; Maulana, Madam Taqiyya
  Source: SCIENTIFIC REPORTS,15(1): AUG 25, 2025
  DOI: 10.1038/s41598-025-15522-7
• Modeling of T cell-mediated autoimmune pituitary disease using human induced pluripotent stem cell-originated organoid
  Author(s): Kanie, Keitaro; Ito, Takeshi; Iguchi, Genzo; Matsumoto, Ryusaku; Muguruma, Keiko; Urai, Shin; et al.
  Source: NATURE COMMUNICATIONS,16(1): AUG 25, 2025
  DOI: 10.1038/s41467-025-63183-x
• An iPSC-based in vitro model recapitulates human thymic epithelial development and multi-lineage specification
  Author(s): Pretemer, Yann; Gao, Yuxian; Kanai, Kaho; Yamamoto, Takuya; Kometani, Kohei; Ozaki, Manami; et al.
  Source: NATURE COMMUNICATIONS,16(1): AUG 25, 2025
  DOI: 10.1038/s41467-025-62523-1
• Expert opinions regarding the concept of blue carbon in seaweed systems
  Author(s): Nishihara, Gregory N.; Sato, Yoichi; Eger, Aaron M.; Gallagher, John Barry; Hurd, Catriona; Kawai, Hiroshi; et al.
  Source: PHYCOLOGICAL RESEARCH: AUG 23, 2025
  DOI: 10.1111/pre.70009
• Probing the Quantum Capacitance of Rydberg Transitions of Surface Electrons on Liquid Helium via Microwave Frequency Modulation
  Author(s): Jennings, Asher; Grytsenko, Ivan; Tian, Yiran; Rybalko, Oleksiy; Wang, Jun; Barabash, Itay Josef; et al.
  Source: PHYSICAL REVIEW LETTERS,135(8): AUG 22, 2025
  DOI: 10.1103/5y8p-qhb4
• Non-Gaussian variational data assimilation with reverse-lognormal errors
  Author(s): Goodliff, Michael; Hossen, Md Jakir; Van Loon, Senne; Fletcher, Steven J.
  Source: QUARTERLY JOURNAL OF THE ROYAL METEOROLOGICAL SOCIETY,151(770): JUL, 2025
  DOI: 10.1002/qj.4965
• Implications of the electromagnetic scale anomaly to the QCD chiral phase transition in the smaller quark mass regime: Tpc does not drop with eB
  Author(s): Wang, Yuanyuan; Matsuzaki, Shinya; Kawaguchi, Mamiya; Tomiya, Akio
  Source: PHYSICAL REVIEW D,111(11): JUN 16, 2025
  DOI: 10.1103/zzd7-86cm
• Density of states method for symplectic gauge theories at finite temperature
  Author(s): Bennett, Ed; Lucini, Biagio; Mason, David; Piai, Maurizio; Rinaldi, Enrico; Vadacchino, Davide
  Source: PHYSICAL REVIEW D,111(11): JUN 16, 2025
  DOI: 10.1103/PhysRevD.111.114511
• Decarbonization path of natural gas combined cycle using chemical looping hydrogen generation: Thermodynamics, emissions, and economics studies
  Author(s): Ahmad, Azaria Haykal; Aziz, Muhammad
  Source: ENERGY,335: OCT 30, 2025
  DOI: 10.1016/j.energy.2025.137916
• The tale of donanemab: God is in the details
  Author(s): Saido, Takaomi C.; Iwata, Nobuhisa
  Source: JOURNAL OF ALZHEIMERS DISEASE: SEP 3, 2025
  DOI: 10.1177/13872877251371240
• Molecular containment of iron source inhibits larval survival of Schistosoma mansoni and egg-laying behavior of the female adult worms via ovarian atrophy
  Author(s): Kumagai, Takashi; Shimogawara, Rieko; Wada, Akira
  Source: TROPICAL MEDICINE AND HEALTH,53(1): SEP 2, 2025
  DOI: 10.1186/s41182-025-00800-x
• Transforming spent coffee grounds into sulfonated char: an eco-innovative method using a refined simultaneous sulfonation-carbonization process
  Author(s): Stefani, Maria; Lunardi, Valentino Bervia; Go, Alchris Woo; Cheng, Kuan-Chen; Hsu, Hsien-Yi; Lin, Shin-Ping; et al.
  Source: BIOMASS CONVERSION AND BIOREFINERY: SEP 1, 2025
  DOI: 10.1007/s13399-025-06881-2
• When and where should aquaculture nets be deployed in a nursery site to maximize Cladosiphon okamuranus growth?
  Author(s): Nagoe, Hikari; Nishihara, Gregory N.; Numata, Yuichiro; Tozaki, Kandai; Maeganeku, Kaoru; Tanaka, Atsuko; et al.
  Source: PHYCOLOGICAL RESEARCH: SEP 1, 2025
  DOI: 10.1111/pre.70011
• Flux-periodic supercurrent oscillations in an Aharonov-Bohm-type nanowire Josephson junction
  Author(s): Zellekens, Patrick; Deacon, Russell S.; Basaric, Farah; Juluri, Raghavendra; Randle, Michael D.; Bennemann, Benjamin; et al.
  Source: COMMUNICATIONS PHYSICS,8(1): SEP 1, 2025
  DOI: 10.1038/s42005-025-02242-7
• Metasurface-based Airy light-sheet fluorescence microscopy
  Author(s): Hsu, Hung-Chuan; Vyas, Sunil; Chu, Cheng Hung; Wu, Jui-Ching; Tanaka, Takuo; Huang, Kuang-Yuh; et al.
  Source: APPLIED PHYSICS REVIEWS,12(3): SEP, 2025
  DOI: 10.1063/5.0264429
• Hybridization of lattice and charge order excitations in a superconducting cuprate
  Author(s): Souliou, Sofia-Michaela; Ishikawa, Daisuke; Heid, Rolf; Bessas, Dimitrios; Kim, Hun-ho; Betto, Davide; et al.
  Source: COMMUNICATIONS PHYSICS,8(1): SEP 1, 2025
  DOI: 10.1038/s42005-025-02278-9
• On factorizations of certain Kummer characters associated to once-punctured elliptic curves with complex multiplication
  Author(s): Ishii, Shun; Goto, Yuki
  Source: INTERNATIONAL JOURNAL OF NUMBER THEORY: AUG 29, 2025
  DOI: 10.1142/S1793042126500016
• Regulation of antiviral and antimicrobial innate immunity and immune evasion
  Author(s): Wang, Ling; He, Dandan; Satoh-Takayama, Naoko; Zheng, Chunfu; Xing, Junji
  Source: CELLULAR AND MOLECULAR LIFE SCIENCES,82(1): AUG 29, 2025
  DOI: 10.1007/s00018-025-05864-w
• X-ray phase measurements by time-energy correlated photon pairs
  Author(s): Klein, Yishai; Strizhevsky, Edward; Aknin, Haim; Deutsch, Moshe; Cohen, Eliahu; Pe'er, Avi; et al.
  Source: SCIENCE ADVANCES,11(35): AUG 27, 2025
  DOI: 10.1126/sciadv.adw3893
• Coexistence of anomalous spin dynamics and weak magnetic order in the chiral trillium lattice K₂FeSn(PO₄)₃
  Author(s): Khatua, J.; Krishnamoorthi, S.; Koo, Changhyun; Ban, Gyungbin; Kim, Taeyun; Kim, Suyoung; et al.
  Source: PHYSICAL REVIEW B,112(6): AUG 20, 2025
  DOI: 10.1103/lmsf-73hn
• Predictor-assisted evolutionary neural architecture search for spiking neural networks
  Author(s): Wang, Yuting; Xue, Yu; Ding, Wei; Tan, Yiyu; Chen, Peng; Wahib, Mohamed
  Source: NEUROCOMPUTING,654: NOV 14, 2025
  DOI: 10.1016/j.neucom.2025.131244
• Spacetime profile of electromagnetic fields in intermediate-energy heavy-ion collisions
  Author(s): Taya, Hidetoshi
  Source: PHYSICAL REVIEW C,112(2): AUG 18, 2025
  DOI: 10.1103/t52d-qcw1
• Volitional and forced running ability in mice lacking intact primary motor cortex
  Author(s): Abo, Ryusei; Ishikawa, Mei; Shinohara, Rio; Michikawa, Takayuki; Imayoshi, Itaru
  Source: FRONTIERS IN NEURAL CIRCUITS,19: AUG 14, 2025
  DOI: 10.3389/fncir.2025.1630932
• Protecting Consumer Electronics Human-Computer Interactive Verification Security via Anomaly-Aware Reconstruction-Guided Forgery Localization
  Author(s): Jin, Zehui; Zeng, Yangyan; Liu, Tenghao; Liu, Xinyue; Leng, Biao; Zhou, Xiaokang
  Source: IEEE TRANSACTIONS ON CONSUMER ELECTRONICS,71(2): MAY, 2025
  DOI: 10.1109/TCE.2025.3566783
• Biodegradability of polyisoprene rubber cross-linked with poly(L-cysteine) cross-linker
  Author(s): Tsuchiya, Kousuke; Tsuji, Yui; Terada, Kayo; Horii, Yoko; Numata, Keiji
  Source: POLYMER DEGRADATION AND STABILITY,242: DEC, 2025
  DOI: 10.1016/j.polymdegradstab.2025.111624
• Paracrine IGFBP3 spatially coordinates IGF signaling to induce myocardial regeneration in mice
  Author(s): Ali, Shah R.; Nguyen, Ngoc Uyen Nhi; Elhelaly, Waleed; Hsu, Ching-Cheng; Menendez-Montes, Ivan; Li, Shujuan; et al.
  Source: JOURNAL OF MOLECULAR AND CELLULAR CARDIOLOGY,207: OCT, 2025
  DOI: 10.1016/j.yjmcc.2025.08.004
• Statistical inference for the dynamic time warping distance, with application to abnormal time-series detection
  Author(s): Duy, Vo Nguyen Le; Takeuchi, Ichiro
  Source: ANNALS OF THE INSTITUTE OF STATISTICAL MATHEMATICS: SEP 3, 2025
  DOI: 10.1007/s10463-025-00955-8
• Genetic suppression features ABHD18 as a Barth syndrome therapeutic target
  Author(s): Masud, Sanna N.; Srivastava, Anchal; Mero, Patricia; Echezarreta, Victoria Saba; Anderson, Eve; van Buren, Lennard; et al.
  Source: NATURE: SEP 3, 2025
  DOI: 10.1038/s41586-025-09373-5
• The Ab Initio Understanding of Solid Oxygen: The Alpha and Delta Phases
  Author(s): Anh, Le The
  Source: JOURNAL OF PHYSICAL CHEMISTRY C: SEP 1, 2025
  DOI: 10.1021/acs.jpcc.5c04304
• Duganella hordei sp. nov., Duganella caerulea sp. nov., and Duganella rhizosphaerae sp. nov., isolated from barley rhizosphere
  Author(s): Kishiro, Katsumoto; Sahin, Nurettin; Saisho, Daisuke; Yamaji, Naoki; Yamashita, Jun; Monden, Yuki; et al.
  Source: ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY,118(10): SEP 1, 2025
  DOI: 10.1007/s10482-025-02160-2
• Case-Control Study for 23 Cancer Types With Functional Analysis of CHEK2: Risk Estimation and Clinical Recommendations in East Asia
  Author(s): Takehara, Yuri; Usui, Yoshiaki; Stolarova, Lenka; Kleiblova, Petra; Iwasaki, Yusuke; Johnson, Todd A.; et al.
  Source: JCO PRECISION ONCOLOGY,9: SEP, 2025
  DOI: 10.1200/PO-24-00945
• Non-collinear ferroelectric H₂O ice VIII
  Author(s): Fukui, Hiroshi; Iitaka, Toshiaki
  Source: JOURNAL OF CHEMICAL PHYSICS,163(8): AUG 28, 2025
  DOI: 10.1063/5.0284931
• Measurement of the transverse energy density in Au plus Au collisions at √S_NN=200 GeV with the sPHENIX detector
  Author(s): Abdulhamid, M. I.; Acharya, U.; Adams, E. R.; Adawi, G.; Aidala, C. A.; Akiba, Y.; et al.
  Source: PHYSICAL REVIEW C,112(2): AUG 21, 2025
  DOI: 10.1103/h8d5-swg6