3月14日-3月20日

Published Research Papers of RIKEN Researchers
total number of papers:58

• Profibrotic properties of C1q(+) interstitial macrophages in silica-induced pulmonary fibrosis in mice
  Author(s): Ogawa, Tatsuro; Shichino, Shigeyuki; Ueha, Satoshi; Bando, Kana; Matsushima, Kouji
  Source: BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS,599: APR 9, 2022
  DOI: 10.1016/j.bbrc.2022.02.037
• Review of recent developments in ultra-high field (UHF) NMR magnets in the Asia region
  Author(s): Yanagisawa, Y.; Hamada, M.; Hashi, K.; Maeda, H.
  Source: SUPERCONDUCTOR SCIENCE & TECHNOLOGY,35(4): APR 1, 2022
  DOI: 10.1088/1361-6668/ac5644
• Immune gene activation by NPR and TGA transcriptional regulators in the model monocot Brachypodium distachyon
  Author(s): Shimizu, Kohei; Suzuki, Hitomi; Uemura, Takuya; Nozawa, Akira; Desaki, Yoshitake; Hoshino, Ryosuke; et al.
  Source: PLANT JOURNAL: MAR 2, 2022
  DOI: 10.1111/tpj.15681
• Article Immune subtypes and neoantigen-related immune evasion in advanced colorectal cancer
  Author(s): Sugawara, Toshitaka; Miya, Fuyuki; Ishikawa, Toshiaki; Lysenko, Artem; Nishino, Jo; Kamatani, Takashi; et al.
  Source: ISCIENCE,25(2): FEB 18, 2022
  DOI: 10.1016/j.isci.2022.103740
• A jerk-based algorithm ACCEL for the accurate classification of sleep-wake states from arm acceleration
  Author(s): Ode, Koji L.; Shi, Shoi; Katori, Machiko; Mitsui, Kentaro; Takanashi, Shin; Oguchi, Ryo; et al.
  Source: ISCIENCE,25(2): FEB 18, 2022
  DOI: 10.1016/j.isci.2021.103727
• Hydrostatic pressure-induced magnetic and topological phase transitions in the MnBi2Te4 family of materials
  Author(s): Xu, Zhiming; Ye, Meng; Li, Jiaheng; Duan, Wenhui; Xu, Yong
  Source: PHYSICAL REVIEW B,105(8): FEB 17, 2022
  DOI: 10.1103/PhysRevB.105.085129
• Active Classification With Uncertainty Comparison Queries
  Author(s): Cui, Zhenghang; Sato, Issei
  Source: NEURAL COMPUTATION,34(3): FEB 17, 2022
  DOI: 10.1162/neco_a_01473
• Effects of Depth of Fault Slip and Continental Shelf Geometry on the Generation of Anomalously Long-Period Tsunami by the July 2020 Mw 7.8 Shumagin (Alaska) Earthquake
  Author(s): Mulia, Iyan E.; Heidarzadeh, Mohammad; Satake, Kenji
  Source: GEOPHYSICAL RESEARCH LETTERS,49(3): FEB 16, 2022
  DOI: 10.1029/2021GL094937
• Lattice QCD Calculation of the Pion Mass Splitting
  Author(s): Feng, Xu; Jin, Luchang; Riberdy, Michael Joseph
  Source: PHYSICAL REVIEW LETTERS,128(5): FEB 3, 2022
  DOI: 10.1103/PhysRevLett.128.052003
• Analysis of Fluctuation in the Heme-Binding Pocket and Heme Distortion in Hemoglobin and Myoglobin
  Author(s): Kondo, Hiroko X.; Takano, Yu
  Source: LIFE-BASEL,12(2): FEB, 2022
  DOI: 10.3390/life12020210
• Discrete time crystal in a driven-dissipative Bose-Hubbard model with two-photon processes
  Author(s): Liu, Tong; Zhang, Yu-Ran; Xu, Kai; Cui, Jian; Fan, Heng
  Source: PHYSICAL REVIEW A,105(1): JAN 14, 2022
  DOI: 10.1103/PhysRevA.105.013710
• Spatial control of cell division by GA-OsGRF7/8 module in a leaf explaining the leaf length variation between cultivated and wild rice
  Author(s): Jathar, Vikram; Saini, Kumud; Chauhan, Ashish; Rani, Ruchi; Ichihashi, Yasunori; Ranjan, Aashish
  Source: NEW PHYTOLOGIST: MAR 3, 2022
  DOI: 10.1111/nph.18029
• C10orf99/GPR15L Regulates Proinflammatory Response of Keratinocytes and Barrier Formation of the Skin
  Author(s): Dainichi, Teruki; Nakano, Yuri; Doi, Hiromi; Nakamizo, Satoshi; Nakajima, Saeko; Matsumoto, Reiko; et al.
  Source: FRONTIERS IN IMMUNOLOGY,13: FEB 22, 2022
  DOI: 10.3389/fimmu.2022.825032
• CRISPR-Cas3-based diagnostics for SARS-CoV-2 and influenza virus
  Author(s): Yoshimi, Kazuto; Takeshita, Kohei; Yamayoshi, Seiya; Shibumura, Satomi; Yamauchi, Yuko; Yamamoto, Masaki; et al.
  Source: ISCIENCE,25(2): FEB 18, 2022
  DOI: 10.1016/j.isci.2022.103830
• Optical spin transport theory of spin-1/2 topological Fermi superfluids
  Author(s): Tajima, Hiroyuki; Sekino, Yuta; Uchino, Shun
  Source: PHYSICAL REVIEW B,105(6): FEB 16, 2022
  DOI: 10.1103/PhysRevB.105.064508
• Identification of novel HPFH-like mutations by CRISPR base editing that elevate the expression of fetal hemoglobin
  Author(s): Ravi, Nithin Sam; Wienert, Beeke; Wyman, Stacia K.; Bell, Henry William; George, Anila; Mahalingam, Gokulnath; et al.
  Source: ELIFE,11: FEB 11, 2022
  DOI: 10.7554/eLife.65421
• Cytosolic Glutamine Synthetase GS1;3 Is Involved in Rice Grain Ripening and Germination
  Author(s): Fujita, Takayuki; Beier, Marcel Pascal; Tabuchi-Kobayashi, Mayumi; Hayatsu, Yoshitaka; Nakamura, Haruka; Umetsu-Ohashi, Toshiko; et al.
  Source: FRONTIERS IN PLANT SCIENCE,13: FEB 8, 2022
  DOI: 10.3389/fpls.2022.835835
• Optimizing PET Glycolysis with an Oyster Shell-Derived Catalyst Using Response Surface Methodology
  Author(s): Kim, Yonghwan; Kim, Minjun; Hwang, Jeongwook; Im, Eunmi; Moon, Geon Dae
  Source: POLYMERS,14(4): FEB, 2022
  DOI: 10.3390/polym14040656
• Constraining the Nucleon Size with Relativistic Nuclear Collisions
  Author(s): Giacalone, Giuliano; Shen, Chun; Schenke, Bjorn
  Source: PHYSICAL REVIEW LETTERS,128(4): JAN 27, 2022
  DOI: 10.1103/PhysRevLett.128.042301
• In Silico and In Cell Hybrid Selection of Nonrapalog Ligands to Allosterically Inhibit the Kinase Activity of mTORC1
  Author(s): Shams, Raef; Matsukawa, Akihiro; Ochi, Yukari; Ito, Yoshihiro; Miyatake, Hideyuki
  Source: JOURNAL OF MEDICINAL CHEMISTRY,65(2): JAN 27, 2022
  DOI: 10.1021/acs.jmedchem.1c00536
• Doubly heavy tetraquark resonant states
  Author(s): Meng, Qi; Harada, Masayasu; Hiyama, Emiko; Hosaka, Atsushi; Oka, Makoto
  Source: PHYSICS LETTERS B,824: JAN 10, 2022
  DOI: 10.1016/j.physletb.2021.136800
• Oxytocin Facilitates Allomaternal Behavior under Stress in Laboratory Mice
  Author(s): Tsuneoka, Yousuke; Yoshihara, Chihiro; Ohnishi, Ryuko; Yoshida, Sachine; Miyazawa, Eri; Yamada, Masanobu; et al.
  Source: ENEURO,9(1): JAN-FEB, 2022
  DOI: 10.1523/ENEURO.0405-21.2022
• Search for alpha condensed states in C-13 using alpha inelastic scattering
  Author(s): Inaba, K.; Sasamoto, Y.; Kawabata, T.; Fujiwara, M.; Funaki, Y.; Hatanaka, K.; et al.
  Source: PROGRESS OF THEORETICAL AND EXPERIMENTAL PHYSICS,2021(9): SEP 7, 2021
  DOI: 10.1093/ptep/ptab102
• Federated Transfer Learning Based Cross-Domain Prediction for Smart Manufacturing
  Author(s): Wang, Kevin I-Kai; Zhou, Xiaokang; Liang, Wei; Yan, Zheng; She, Jinhua
  Source: IEEE TRANSACTIONS ON INDUSTRIAL INFORMATICS,18(6): JUN, 2022
  DOI: 10.1109/TII.2021.3088057
• Electrocardiogram Measurement and Emotion Estimation of Working Dogs
  Author(s): Ohno, Kazunori; Sato, Kotaro; Hamada, Ryunosuke; Kubo, Takatomi; Ikeda, Kazushi; Nagasawa, Miho; et al.
  Source: IEEE ROBOTICS AND AUTOMATION LETTERS,7(2): APR, 2022
  DOI: 10.1109/LRA.2022.3145590
• Root cause estimation of faults in production processes: a novel approach inspired by approximate Bayesian computation
  Author(s): Otsubo, Yosuke; Otani, Naoya; Chikasue, Megumi; Nishino, Mineyuki; Sugiyama, Masashi
  Source: INTERNATIONAL JOURNAL OF PRODUCTION RESEARCH: MAR 5, 2022
  DOI: 10.1080/00207543.2022.2042611
• Differential regulation of fluorescent alkaloid metabolism between idioblast and lacticifer cells during leaf development in Catharanthus roseus seedlings
  Author(s): Uzaki, Mai; Yamamoto, Kotaro; Murakami, Akio; Fuji, Yushiro; Ohnishi, Miwa; Ishizaki, Kimitsune; et al.
  Source: JOURNAL OF PLANT RESEARCH: MAR 4, 2022
  DOI: 10.1007/s10265-022-01380-1
• Boosting the predictive performance with aqueous solubility dataset curation
  Author(s): Meng, Jintao; Chen, Peng; Wahib, Mohamed; Yang, Mingjun; Zheng, Liangzhen; Wei, Yanjie; et al.
  Source: SCIENTIFIC DATA,9(1): MAR 3, 2022
  DOI: 10.1038/s41597-022-01154-3
• An inexact successive quadratic approximation method for a class of difference-of-convex optimization problems
  Author(s): Liu, Tianxiang; Takeda, Akiko
  Source: COMPUTATIONAL OPTIMIZATION AND APPLICATIONS: MAR 2, 2022
  DOI: 10.1007/s10589-022-00357-z
• Long-Term Mental Health Support after Natural Hazard Events: A Report from an Online Survey among Experts in Japan
  Author(s): Kayano, Ryoma; Lin, Mingming; Shinozaki, Yasuko; Nomura, Shuhei; Kim, Yoshiharu
  Source: INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH,19(5): MAR, 2022
  DOI: 10.3390/ijerph19053022
• Multiple nutritional and gut microbial factors associated with allergic rhinitis: the Hitachi Health Study
  Author(s): Sahoyama, Yukari; Hamazato, Fumiaki; Shiozawa, Manabu; Nakagawa, Tohru; Suda, Wataru; Ogata, Yusuke; et al.
  Source: SCIENTIFIC REPORTS,12(1): MAR 1, 2022
  DOI: 10.1038/s41598-022-07398-8
• Spectral functions of heavy quarkonia in a bulk-viscous quark gluon plasma
  Author(s): Thakur, Lata; Hirono, Yuji
  Source: JOURNAL OF HIGH ENERGY PHYSICS(2): FEB 28, 2022
  DOI: 10.1007/JHEP02(2022)207
• Kastor and Polluks polypeptides encoded by a single gene locus cooperatively regulate VDAC and spermatogenesis
  Author(s): Mise, Shintaro; Matsumoto, Akinobu; Shimada, Keisuke; Hosaka, Toshiaki; Takahashi, Masatomo; Ichihara, Kazuya; et al.
  Source: NATURE COMMUNICATIONS,13(1): FEB 28, 2022
  DOI: 10.1038/s41467-022-28677-y
• Autoregulation and dual stepping mode of MYA2, an Arabidopsis myosin XI responsible for cytoplasmic streaming
  Author(s): Haraguchi, Takeshi; Ito, Kohji; Morikawa, Takamitsu; Yoshimura, Kohei; Shoji, Nao; Kimura, Atsushi; et al.
  Source: SCIENTIFIC REPORTS,12(1): FEB 24, 2022
  DOI: 10.1038/s41598-022-07047-0
• Viscoplastic Material Modeling for the Stretch Blow Molding Simulation
  Author(s): Wang, S.; Makinouchi, A.; Okamoto, M.; Kotaka, T.; Maeshima, M.; Ibe, N.; et al.
  Source: INTERNATIONAL POLYMER PROCESSING,15(2): FEB 23, 2022
  DOI: 10.1515/ipp-2000-0008
• Preparing the next gravitational million-body simulations: evolution of single and binary stars in nbody6++gpu, mocca, and mcluster
  Author(s): Kamlah, A. W. H.; Leveque, A.; Spurzem, R.; Sedda, M. Arca; Askar, A.; Banerjee, S.; et al.
  Source: MONTHLY NOTICES OF THE ROYAL ASTRONOMICAL SOCIETY,511(3): FEB 23, 2022
  DOI: 10.1093/mnras/stab3748
• The common limitations in auditory temporal processing for Mandarin Chinese and Japanese
  Author(s): Eguchi, Hikaru; Ueda, Kazuo; Remijn, Gerard B.; Nakajima, Yoshitaka; Takeichi, Hiroshige
  Source: SCIENTIFIC REPORTS,12(1): FEB 22, 2022
  DOI: 10.1038/s41598-022-06925-x
• High-throughput identification and quantification of single bacterial cells in the microbiota
  Author(s): Jin, Jianshi; Yamamoto, Reiko; Takeuchi, Tadashi; Cui, Guangwei; Miyauchi, Eiji; Hojo, Nozomi; et al.
  Source: NATURE COMMUNICATIONS,13(1): FEB 22, 2022
  DOI: 10.1038/s41467-022-28426-1
• SkewC: Identifying cells with skewed gene body coverage in single-cell RNA sequencing data
  Author(s): Abugessaisa, Imad; Hasegawa, Akira; Noguchi, Shuhei; Cardon, Melissa; Watanabe, Kazuhide; Takahashi, Masataka; et al.
  Source: ISCIENCE,25(2): FEB 18, 2022
  DOI: 10.1016/j.isci.2022.103777
• Atmospheric Electron Spatial Range Extended by Thundercloud Electric Field Below the Relativistic Runaway Electron Avalanche Threshold
  Author(s): Diniz, G.; Wada, Y.; Ohira, Y.; Nakazawa, K.; Enoto, T.
  Source: JOURNAL OF GEOPHYSICAL RESEARCH-ATMOSPHERES,127(3): FEB 16, 2022
  DOI: 10.1029/2021JD035958
• Regulation of ammonium acquisition and use in Oryza longistaminata ramets under nitrogen source heterogeneity
  Author(s): Kawai, Misato; Tabata, Ryo; Ohashi, Miwa; Honda, Haruno; Kamiya, Takehiro; Kojima, Mikiko; et al.
  Source: PLANT PHYSIOLOGY: FEB 4, 2022
  DOI: 10.1093/plphys/kiac025
• Simultaneous Detection of Plant- and Fungus-Derived Genes Constitutively Expressed in Single Pseudoidium neolycopersici-Inoculated Type I Trichome Cells of Tomato Leaves via Multiplex RT-PCR and Nested PCR
  Author(s): Iwasaki, Shota; Okada, Naoko; Kimura, Yutaka; Takikawa, Yoshihiro; Suzuki, Tomoko; Kakutani, Koji; et al.
  Source: AGRICULTURE-BASEL,12(2): FEB, 2022
  DOI: 10.3390/agriculture12020254
• Dihydrolucilactaene, a Potent Antimalarial Compound from Fusarium sp. RK97-94
  Author(s): Abdelhakim, Islam A.; Bin Mahmud, Fauze; Motoyama, Takayuki; Futamura, Yushi; Takahashi, Shunji; Osada, Hiroyuki
  Source: JOURNAL OF NATURAL PRODUCTS,85(1): JAN 28, 2022
  DOI: 10.1021/acs.jnatprod.1c00677
• Noncanonical function of the Sexlethal gene controls the protogyny phenotype in Drosophila melanogaster
  Author(s): Seong, Ki-Hyeon; Kang, Siu
  Source: SCIENTIFIC REPORTS,12(1): JAN 27, 2022
  DOI: 10.1038/s41598-022-05147-5
• Precision cancer genome testing needs proficiency testing involving all stakeholders
  Author(s): Maekawa, Masato; Taniguchi, Terumi; Nishio, Kazuto; Sakai, Kazuko; Matsushita, Kazuyuki; Nakatani, Kaname; et al.
  Source: SCIENTIFIC REPORTS,12(1): JAN 27, 2022
  DOI: 10.1038/s41598-022-05589-x
• Why sequence all eukaryotes?
  Author(s): Blaxter, Mark; Archibald, John M.; Childers, Anna K.; Coddington, Jonathan A.; Crandall, Keith A.; Di Palma, Federica; et al.
  Source: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA,119(4): JAN 25, 2022
  DOI: 10.1073/pnas.2115636118
• Integrating Incompatible Assay Data Sets with Deep Preference Learning
  Author(s): Sun, Xiaolin; Tamura, Ryo; Sumita, Masato; Mori, Kenichi; Terayama, Kei; Tsuda, Koji
  Source: ACS MEDICINAL CHEMISTRY LETTERS,13(1): JAN 13, 2022
  DOI: 10.1021/acsmedchemlett.1c00439
• Efficient Tensor Robust PCA Under Hybrid Model of Tucker and Tensor Train
  Author(s): Qiu, Yuning; Zhou, Guoxu; Huang, Zhenhao; Zhao, Qibin; Xie, Shengli
  Source: IEEE SIGNAL PROCESSING LETTERS,29: , 2022
  DOI: 10.1109/LSP.2022.3143721
• Signatures of Weyl Fermion Annihilation in a Correlated Kagome Magnet
  Author(s): Belopolski, Ilya; Cochran, Tyler A.; Liu, Xiaoxiong; Cheng, Zi-Jia; Yang, Xian P.; Guguchia, Zurab; et al.
  Source: PHYSICAL REVIEW LETTERS,127(25): DEC 17, 2021
  DOI: 10.1103/PhysRevLett.127.256403
• Cone-Size Dependence of Jet Suppression in Heavy-Ion Collisions
  Author(s): Mehtar-Tani, Yacine; Pablos, Daniel; Tywoniuk, Konrad
  Source: PHYSICAL REVIEW LETTERS,127(25): DEC 17, 2021
  DOI: 10.1103/PhysRevLett.127.252301
• Quasiparticle Nodal Plane in the Fulde-Ferrell-Larkin-Ovchinnikov State of FeSe
  Author(s): Kasahara, S.; Suzuki, H.; Machida, T.; Sato, Y.; Ukai, Y.; Murayama, H.; et al.
  Source: PHYSICAL REVIEW LETTERS,127(25): DEC 17, 2021
  DOI: 10.1103/PhysRevLett.127.257001
• In vitro reconstitution of the Escherichia coli 70S ribosome with a full set of recombinant ribosomal proteins
  Author(s): Aoyama, Ryo; Masuda, Keiko; Shimojo, Masaru; Kanamori, Takashi; Ueda, Takuya; Shimizu, Yoshihiro
  Source: JOURNAL OF BIOCHEMISTRY: NOV 8, 2021
  DOI: 10.1093/jb/mvab121
• JAMIR-eQTL: Japanese genome-wide identification of microRNA expression quantitative trait loci across dementia types
  Author(s): Akiyama, Shintaro; Higaki, Sayuri; Ochiya, Takahiro; Ozaki, Kouichi; Niida, Shumpei; Shigemizu, Daichi
  Source: DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION,2021: NOV 3, 2021
  DOI: 10.1093/database/baab072
• Misaligned Rotations of the Envelope, Outflow, and Disks in the Multiple Protostellar System of VLA 1623-2417: FAUST. III
  Author(s): Ohashi, Satoshi; Codella, Claudio; Sakai, Nami; Chandler, Claire J.; Ceccarelli, Cecilia; Alves, Felipe; et al.
  Source: ASTROPHYSICAL JOURNAL,927(1): MAR 1, 2022
  DOI: 10.3847/1538-4357/ac4cae
• Rapid Detection of Neutral Faces Associated With Emotional Value Among Older Adults
  Author(s): Saito, Akie; Sato, Wataru; Yoshikawa, Sakiko
  Source: JOURNALS OF GERONTOLOGY SERIES B-PSYCHOLOGICAL SCIENCES AND SOCIAL SCIENCES: FEB 8, 2022
  DOI: 10.1093/geronb/gbac009
• The TGN/EE SNARE protein SYP61 and the ubiquitin ligase ATL31 cooperatively regulate plant responses to carbon/nitrogen conditions in Arabidopsis
  Author(s): Hasegawa, Yoko; Reyes, Thais Huarancca; Uemura, Tomohiro; Baral, Anirban; Fujimaki, Akari; Luo, Yongming; et al.
  Source: PLANT CELL: JAN 28, 2022
  DOI: 10.1093/plcell/koac014
• Modeling Unsupervised Empirical Adaptation by DPGMM and DPGMM-RNN Hybrid Model to Extract Perceptual Features for Low-Resource ASR
  Author(s): Wu, Bin; Sakti, Sakriani; Zhang, Jinsong; Nakamura, Satoshi
  Source: IEEE-ACM TRANSACTIONS ON AUDIO SPEECH AND LANGUAGE PROCESSING,30: , 2022
  DOI: 10.1109/TASLP.2022.3150220
• Comparison Theorems on Weighted Finsler Manifolds and Spacetimes with epsilon-Range
  Author(s): Lu, Yufeng; Minguzzi, Ettore; Ohta, Shin-ichi
  Source: ANALYSIS AND GEOMETRY IN METRIC SPACES,10(1): JAN 1, 2022
  DOI: 10.1515/agms-2020-0131